>P23527 (126 residues) MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT KYTSSK |
Sequence |
20 40 60 80 100 120 | | | | | | MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC |
Confidence | 999877788876543345455667766544556643046889999986337888438999999999999999999999999986178998389999889986639999999988748998641269 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
Prediction | 847547646576554555456666676444554555403210220034236734124402420231044214410430242143473442444302200300012400420234034114424658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK | |||||||||||||||||||
1 | 4khaA | 0.78 | 0.56 | 15.94 | 0.83 | DEthreader | ----------------------------TRPWSVI-SYAIYVYKVLKQ-VHPTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVEGTKAV-KY--A-- | |||||||||||||
2 | 1kx5D | 0.93 | 0.90 | 25.40 | 2.51 | SPARKS-K | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
3 | 2f8nG | 0.20 | 0.15 | 4.81 | 0.66 | MapAlign | ---------------------------TSRSAKAGVIFVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAND--EELNQLLKGVTIASGGVL---- | |||||||||||||
4 | 4khaA | 0.70 | 0.70 | 19.85 | 0.59 | CEthreader | EGPLNLNWSVIMKTVTANPHQFFLDGGWGFLQNDSESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA- | |||||||||||||
5 | 1kx5D | 0.93 | 0.90 | 25.40 | 3.11 | MUSTER | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
6 | 1kx5D | 0.93 | 0.90 | 25.40 | 3.53 | HHsearch | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
7 | 1kx5D | 0.93 | 0.90 | 25.40 | 2.39 | FFAS-3D | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
8 | 1kx5D | 0.82 | 0.76 | 21.50 | 0.85 | EigenThreader | ---------AKSAPAPKKGSKKAVTKGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
9 | 6w4lA | 0.96 | 0.69 | 19.37 | 1.01 | CNFpred | -----------------------------------ESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
10 | 5zbhA | 0.09 | 0.08 | 3.04 | 0.83 | DEthreader | -LAIFTALAGIGVGNLILSSIWSLVLAVEHIIRRRNIF-EMLRIDEG-----LRLKITIIHL-FDMVFQMGEGVAGF-TNSLR-M-LQQKRWDAAVNLAKSRWYNQTPNRAKRVITTFGTWD-SK- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |