| >P23470 (1445 residues) MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYW AYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNT GKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYN PDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRD LLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVE YLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQ TALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYL FRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTW TSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPT AASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGE KDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRR DAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAE KNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPRRFREV PSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGEL YSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKD SKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRK CDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQ YHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQI KDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSIL IPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGM KGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEF VYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWP NPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVF QVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAES MESLV |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 1340 1360 1380 1400 1420 1440 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPRRFREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV |
| Prediction | CCCSCCCCHHHHHHHHHHHHHHHHSCCCSSCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCHHCHCCCCCCCCCCCCCCSCCCCSSSCCCCCCSSSSCCCCCCCCCSSSSSCCSSSSSSSCCCCSSSCCCCCCCSSSSSSSSSCCCCCCCCCCCSSSCCSSCCSSSSSSSSCCCCCCCHHHHHCCCCCSSSSSSSSSSCCCCCHHHHHHHHHHHCCCCCCCSSSCCCCCHHHHCCCCHCHCSSSCCCCCCCCCCCCSSSSSSCCCSSCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCSSCCCCCCCCCCSSSSSSSSSCCCSSSSSSCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCSSCCCCCCCSSSSSCCCCCCSSSSSSSSSSCCCCCCCCCCCSSSCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSCCSSCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCSSCCSSCCCCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSCSSCCCCCCCCCCCCCCSSSSSSCSCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCSSSSCCCCCCCCSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCSCCCCCCCCCCCSSSCCSSSSSSSSSSSCCCCCCCSSSSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC |
| Confidence | 96210343589998999874422104401022114510136766641221457888998778999881110102778899886981526664245789886388556678888559998794899993898579716899857999999845899999998526578213317999985665478999984179958999999981576673289999876503579926764899978838987110334227678999976189999488354389999999998425778777766625577778887898178997236655554443245430000355555522679998403426899970787667764036899999637998653213436777515998367999448999999966998788875247426877667764212124543578876556887778851222130113321123447888885322023200222467776777655687654666688888887457632235777677888887766655666554566555665567775554467766544567776666554566677654567764367887567887767667777666654346887787655665557876543235557888776766655678876654124302357777765445777887643112022356777888876543102212432123457765444456667677665311134443456777865468887642357889986109999999999984253016999999763068888775674180110237988868886876885226888888888124433316999861899548951478999999871187399993563668943134649899971780489999999963977999999997010344455667899728999962178998998999349999999999866899996899858995646799999999999996198659999999998630125799999999999999874144544444322100110134556654213443321135667653101357122124777887898766356046888888884103542378888748996388536899999999861984999857862598314121889998579855999999977632567887799999999889995699999864899998979726999999999984479997899858997325599999999999985696469999999998566655899999999999999998535688875534455523577877333344229 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 1340 1360 1380 1400 1420 1440 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPRRFREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV |
| Prediction | 63211000000000101010011000000001011110131231221313444045433000324322644454124043530000304464042356044040420334244313020111001020464220000206340201000000024344400001114420000000000126314304403645300000000010045415303301410440444445240460404200142242001020000102030000000033104003400310030012354344434320210000102143021101124442344224213312432233102100120324434443020214324332424123011101204455644452345544413010430434120000000102342434243422143644422444432544444454444444423444444234442424214210424254442444244413442444241444434424343234434444444443443244445434444254644445445444444544445455454544555555465454554444464464443444544444446544443444444444324544444444424342443342321433444344444444443444431445543344222021333444244424434444443210100000000000000000000213344346554444444454445444543443143243334445444424644213132245243020430141044024444421341143045344635232520434414620002000011300010333546444300000000010263422000000114401410310010150200000031414544214444156544412403030444443431010202033242444444446466341201000011400210141040003003202622466300000001021110000000000010044544230130023004101100003000100000000000000000000000000101110101010100010101000112211100033441463121210000010001034365564320000000202435320000000142014101101011504012000434356452244305664444134030311334424444433000020204246664403010000011003100440003003202422466510000000000000000000000011044643010130023004100100004300300020001004334444434414443332444544445444426 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820 840 860 880 900 920 940 960 980 1000 1020 1040 1060 1080 1100 1120 1140 1160 1180 1200 1220 1240 1260 1280 1300 1320 1340 1360 1380 1400 1420 1440 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCSCCCCHHHHHHHHHHHHHHHHSCCCSSCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCHHCHCCCCCCCCCCCCCCSCCCCSSSCCCCCCSSSSCCCCCCCCCSSSSSCCSSSSSSSCCCCSSSCCCCCCCSSSSSSSSSCCCCCCCCCCCSSSCCSSCCSSSSSSSSCCCCCCCHHHHHCCCCCSSSSSSSSSSCCCCCHHHHHHHHHHHCCCCCCCSSSCCCCCHHHHCCCCHCHCSSSCCCCCCCCCCCCSSSSSSCCCSSCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCSSCCCCCCCCCCSSSSSSSSSCCCSSSSSSCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCSSCCCCCCCSSSSSCCCCCCSSSSSSSSSSCCCCCCCCCCCSSSCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSCCSSCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCSSCCSSCCCCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSCSSCCCCCCCCCCCCCCSSSSSSCSCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCSSSSCCCCCCCCSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCSCCCCCCCCCCCSSSCCSSSSSSSSSSSCCCCCCCSSSSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPRRFREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV | |||||||||||||||||||
| 1 | 1larA | 0.41 | 0.16 | 4.72 | 0.74 | CEthreader | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITDLADNIERLKANDGLKFSQEYESID---PGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVP--GSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHK-----------SGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPESVTAMELEFKLLASSS----RFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNM-----PQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGFIDFIGQVHKTKEGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------------------------------- | |||||||||||||
| 2 | 1vt4I | 0.05 | 0.03 | 1.58 | 1.26 | MapAlign | ---ETGEHQMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI-EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN----VLIDGVLGSGKTAKIFWLNLKNCNSPETVLEMNCLLVLLNVQNAKA---WNAFNLSCKILLTTRFKLLKYLDCSIIAESIRDVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN----IEHPERMTLF-----RMVFLDFRFLEQKIRHDSTAWNASGSIENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGG----------------GGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGG-----------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGG--GG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGG-------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGG-GGGGGGGGGGGGGGGG----------------GGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------- | |||||||||||||
| 3 | 1larA | 0.31 | 0.11 | 3.47 | 0.87 | EigenThreader | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVI------------------------------------------------------------------------LTSIDGVPGSDYINANYIDGY------------------------------------------------------------------------------RKQNAYIATQ-------------------------------------GPLPETMGDFWRMVWEQRTATVVMM-------TRLCDQYWPARGTETCGLIQVTLL----DTVELVRTFALHKS-----------GSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHT---ENLYAHIQKLGQVPPGESVTAMELEFKLLASSSRFICNKFKN---------RLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREM--GREKCHQYWPAERSARYQMAEYNM------PQYILREFKVTDA----RDGRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------------------------------- | |||||||||||||
| 4 | 2pffB | 0.06 | 0.04 | 1.82 | 1.05 | MapAlign | ---VIQLAHYVVTAKLLGFTPGELRSPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRDINPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGG--GGGGGGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------GGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGG-------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLYKTSKAAQDVWNRADNHFKDTYGFSIL----------------DIVINNPVNLTIHFGGEKGKRI---RENYSAMIFETIVDGKLKTEKIFRSEKGLLSATQFTQPALTLMEKAAFEDLHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
| 5 | 2nlkA | 0.99 | 0.38 | 10.58 | 3.26 | FFAS-3D | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPH-----SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILI-----PTRLEKQFKLVTQCFS-------AQKECNKEKNRNSSVVPSERARVGL-------APDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPF---------VYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVS--------------------------------- | |||||||||||||
| 6 | 2nlkA | 0.99 | 0.38 | 10.60 | 2.96 | SPARKS-K | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPH-----SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIP-----TRLEKQFKLVTQCF-------SAQKECNKEKNRNSSVVPSERARVGL-------APDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPFV---------YWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVS--------------------------------- | |||||||||||||
| 7 | 2nlkA | 1.00 | 0.38 | 10.72 | 6.56 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLP-----HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIP-----TRLEKQFKLVTQC-------FSAQKECNKEKNRNSSVVPSERARVGLAP-------DYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLP---------FVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVS--------------------------------- | |||||||||||||
| 8 | 5xjcA | 0.06 | 0.02 | 0.87 | 0.33 | DEthreader | -RKYVNRWQFTLPMMSTLYRLANQLLTDLVFIKTEDPLFDPLIN---------------N-IAL-----------------------------------GQPVKVRV----------------------------------------------------IHVGQLTGMYRYKYKLM---------------------ERIRRGA---------------------------LTRLYLKAEQERQHNYLKDG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WLESRRFSPIP--------------------------------------FP-----PLSYKHDTKLLILALERLKLGLIEQAYDN--P-HEALSRIKRHLLTQEKITDALDLWFPWIKPADTEPPPLLVYKWCQGI--NNLQDVW-----ETSEGEC---NV---MLESRFEKMYEKIDLTLLNRLLRVDHNIADYMTAKNNVVINNHTNSYGIIRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D-P-------CRILPKCRTSYEEFTHKDGVWNREAVV-------PPVVFYTGLGMLSMGH-----------------GMNLYIRVRTDFKQYQVLKQNP-NRSNQIPNRRFTLSIPTLKISLIQIFLWQKHEKETIHPRKSYKMNSSCADILL--F-----ASY-KWNVSRP-----------------------------------------LDY-TDNMS--VLIAIDLAYNLHSAYGNWFPGSKPLIQQ-----------------P-LNYGELFSQIIWFVDDTNVYRGAIFIFNQLFLKIIHT----SVWAGQKRLGQLAKWK----------------------------------------------------LDFPNI----------------SSDDIKETGYGEKTLYEWGRQNT----------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
| 9 | 2nlkA | 0.99 | 0.38 | 10.66 | 2.35 | MUSTER | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPH-----SDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIP-----TRLEKQFKLVTQCFS-------AQKECNKEKNRNSSVVPSERARVGLAP-------DYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLP---------FVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVS--------------------------------- | |||||||||||||
| 10 | 1larA | 0.42 | 0.16 | 4.78 | 2.98 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITDLADNIERLKANDGLKFSQEYESIDP---GQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGV--PGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKS-----------GSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPESVTAMELEFKLLASS----SRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGEKCHQYWPAER-SARYQYFVVDPMAEYN-----MPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGFIDFIGQVHKTKFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------------------------------- | |||||||||||||
| ||||||||||||||||||||
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
| References: | |
| 1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |