>P23469 (299 residues) LDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQII PYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHT IVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQE EQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFI ALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | LDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQEEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK |
Prediction | CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSSCCCCCCCSSSSSCCCCHHHHHHHHHHHHHHCCCSSSSCCCHHHCCCSCCCCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSSSSSSCCCCCCSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC |
Confidence | 93899999999999642245636899999998706999877024307545640799999998661567414899989971464443268998549995599806899999999972785899835511078423446899999779810999999999618569878999996655437996089999985899999979997999999999999834589998899939999725789999999999982298779999999996622458999999999999999999622211149 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | LDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQEEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK |
Prediction | 45174035105403741663445304523540473535644153043651372020321301330102022476554110000000203745320000000255014000100112503000000224264462134014474544134030303335336413232010223304244664312010010140133111730420040042026224447521000000100000000000000121045544230140022006202300014300200030002005306526528 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSSCCCCCCCSSSSSCCCCHHHHHHHHHHHHHHCCCSSSSCCCHHHCCCSCCCCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSSSSSSCCCCCCSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC LDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQEEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK | |||||||||||||||||||
1 | 2nlkA | 0.35 | 0.33 | 9.98 | 1.50 | DEthreader | IPVKQFVKHIGELY-SN---NQHGFSEDFEEVQRCTAMNITAEHSNHPENKHKNRYINILAYDHSRVKLRP-LP--HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK--VKKGQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARM-PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETE---- | |||||||||||||
2 | 1larA2 | 0.46 | 0.43 | 12.69 | 3.71 | SPARKS-K | VPARNLYAHIQKLGQVPPGESVTAMELEFKLL----ASSSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR-----DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------- | |||||||||||||
3 | 2pa5A | 0.37 | 0.34 | 10.23 | 1.03 | MapAlign | MTIQELVDYVNARQ-------KQGIYEEYEDIRRENPV-GTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTK-----QTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTE-----ERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAAEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMV---- | |||||||||||||
4 | 2pa5A | 0.36 | 0.33 | 9.97 | 0.59 | CEthreader | MTIQELVDYVNARQK-------QGIYEEYEDIRRENPV-GTFHCSMSPGNLEKNRYGDVPCLDQTRVKL-----TKQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQ-----KRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSAH- | |||||||||||||
5 | 1larA2 | 0.46 | 0.43 | 12.69 | 2.81 | MUSTER | VPARNLYAHIQKLGQVPPGESVTAMELEFKLLAS----SSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTD-----ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------- | |||||||||||||
6 | 2nlkA | 0.34 | 0.33 | 9.91 | 2.10 | HHsearch | IPVKQFVKHIGELYSN----NQHGFSEDFEEVQRCTADNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLP---HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR-MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSN | |||||||||||||
7 | 1larA2 | 0.46 | 0.43 | 12.69 | 3.57 | FFAS-3D | VPARNLYAHIQKLGQVPPGESVTAMELEFKLLAS----SSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTD-----ARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------- | |||||||||||||
8 | 1larA2 | 0.45 | 0.43 | 12.51 | 1.43 | EigenThreader | HTERNLYAHIQKLGQVPPGESVTAMELEFKL----LASSSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR-----DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF------- | |||||||||||||
9 | 2h03A | 0.36 | 0.34 | 10.15 | 2.85 | CNFpred | IKINQFEGHFMKLQAD----SNYLLSKEYEELKDVGRNQ-SCDIALLPENRGKNRYNNILPYDATRVKLS-----GGSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQSLYYGDLILQMLSESVLPEWTIREFKICGEE----QLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVLRARKLR---- | |||||||||||||
10 | 2nlkA1 | 0.35 | 0.33 | 9.97 | 1.50 | DEthreader | IPVKQFVKHIGELY-SN---NQHGFSEDFEEVQRCTAMNITAEHSNHPENKHKNRYINILAYDHSRVKLRP-LP--HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTK--VKKGQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARM-PETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILG--K----- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |