Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCSSSSSCCCCCSSSSSCCCSSSSSCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCSCCCCCHHHCCCSSSSSSSSSSCCCCSSSSCCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCSSSSSSCCCCCCCCSSSSSSCCCCCCCSSSSSSSSCCCCCCCSSSSSCHHHHHCCCCSSSSCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCC WMGVTVQSQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLRGHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVGGETEHDESLVPVPANSYLGLLFLTSVSYTDPDQFVYKTRPPREQPDTFPDVMMNSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAHLLPEHIFDGEGLASGILMLALLVFILWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKYIDNLEKKQWITKWNENESYS |
1 | 3fcsA1 | 0.17 | 0.13 | 4.17 | 1.00 | DEthreader | | GLGASVVSW--SDVIVACAPWQHWNVLEKTEEAEKTPVGSCFLAQPESG--------RRAEYSPCRGNTLSDRYCEAGFSSVVTQAG-ELVLGAPGGYYFLGLLAQAPVA-DI----FSSYR-----------------LW-----------------HVSSQSLSFD-SS----NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAV-TD--V--NGDG-RHDLLVGA---------------VYLFLQPRPHALGAPLLLTLRSR |
2 | 4g1eA | 0.24 | 0.19 | 5.79 | 1.95 | SPARKS-K | | WFGASVRSKQ--DKILACAPLYHWRTE---MKQEREPVGTCFLQDG-------TKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKAD-RVLLGGPGSFYWQGQLISDQVAEIVSKY----------------DPNVYSIK----------------YNNQLAT---------RTAQAIFDDSYLGYSVAVGDFN-GDGIDDFVSGVPRAATLGMVYIYDGK----NMSSLYNFTGEQMAAYFGFSVAATDIN-------GDDYADVFPLFM-DRGSDGKLQEVGQVSVSLQRASDFTTKLNGFEVFA |
3 | 3v4pA | 0.18 | 0.17 | 5.63 | 0.71 | MapAlign | | WLGVTLSRQPGNGSIVTCGHRWKNIF--YIKNENKLPTGGCYGVPPDLRT---ELSKRIAPCYQVKKFGENFASCQAGISSFYTK--DLIVMGAPGSSYWTGSLFVYNITTNKVKFGSYLGYSVGAGHFRSQHTTEVVGGGSYFGASVCAVDLNADGFSDLLVGAPVMNAMETNLVGSKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDLQGAIYIYNGRA--DGISFSQRIEGLKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSV- |
4 | 1l5gA | 0.21 | 0.17 | 5.27 | 0.61 | CEthreader | | WFGASVRSK--QDKILACAPLYHWRTEM---KQEREPVGTCFLQDGTK-------TVEYAPCRSQDIDADGQGFCQGGFSIDFTKAD-RVLLGGPGSFYWQGQLISDQVA------------------------------------EIVSKYDPNVYSIKYNNQLATR-----TAQAIFDDSYLGYSVAVGDFNGDG-IDDFVSGVPRAARLGMVYIYDGKN----MSSLYNFTGEQMAAYFGFSVAATDIN-------GDDYADVFIGLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEV |
5 | 3k71G2 | 0.16 | 0.14 | 4.79 | 1.02 | MUSTER | | SLGLSLASTTSPSQLLACGPTVHHEC-----GRNMYLTGLCFLLGP-TQLTQRLPVS-RQECPTTSSSSFELEMAQEGFSAVFTPDG--PVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSL-VLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYTRGGQVSVCPLPRGWRRWWCDAVLYGEHPWGRFGAALTVLGDVNGDK------LTDVVPGEEENR---------GAVYLFHGVLGPHSQRIAGSQLSS |
6 | 4g1eA | 0.19 | 0.17 | 5.37 | 3.15 | HHsearch | | WFGASVRSKQ--DKILACAPLYHWRTEM---KQEREPVGTCFLQDG--TKT-----VEYAPCRSQDIDADGQGFCQGGFSIDFTKAD-RVLLGGPGSFYWQGQLISDQVAEIVS---KYDPNVYKYNNQL-ATRTAQAIFDDSYLGYSVAVGDFNAARLGYIYDGK-NMSSLYNFTGEQMAAYFGFSVAATDINGD-DYADVFIGAPLFMEVGQVSVSLQRAS-GDFQT-TKLNGFEVFARFGSAIAPLDLD-------QDGFNDIAPYGG--------EDKKGIVYIFNGRSTVPSQILEGQWAAR |
7 | 3vi3A1 | 0.18 | 0.17 | 5.39 | 1.32 | FFAS-3D | | WFGATVRAHG--SSILACAPLYSW---RTEKEPLSDPVGTCYLSTDNFTRI-----LEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGR-VVLGGPGSYFWQGQILSATQEQIAE--SYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDTILNGSDIRSLYNFSGEQMASYFGYAVAATD-VNGDGLDDLLVGAPLLMEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPL------GDLDQDGYNDVAIGAP-----FGGETQQGVVFVFPGGPGGLGSKPSQ----- |
8 | 5cwwB2 | 0.09 | 0.07 | 2.89 | 0.75 | EigenThreader | | AVVSAVWHGVNGHALVTVTEDA----------------IVRVWELSTADRWTFDAPTFGVSTSATNKGFSPDAFDMEVAAACFPTRPMTLWLAMTSG----DVYALCPLLPQRWTSASIVAKVAAAEDNPESTPEERLVAQQQLEWMSEIDNQEPTIEVYTRPSRPGLVPKPFNPEDEQDDEVELKDIYVIGEKPRNGLNIICLLSTS----GQVKICLDIDGVEALLTFQTFDTLKPAEVTGWPMFSED------ATSPYSFYV-THPAGITYISLTPGQGSERDRIFTQTRTQSP---------- |
9 | 3v4pA | 0.25 | 0.19 | 5.76 | 2.69 | CNFpred | | WLGVTLSRQPGNGSIVTCGHRWKNIFY---KNENKLPTGGCYGVPPDLRTE---LSKRIAPCYQVKKFGENFASCQAGISSFYT--KDLIVMGAPGSSYWTGSLFVYNITT------------------------------------------------NKYKAFLD------KQNQVKFGSYLGYSVGAGHFRSQ-HTTEVVGGAPQHEQIGKAYIFSIDE--KELNILHEMKGKKLGSYFGASVCAVDLNA-------DGFSDLLVGAPMQS-----IREEGRVFVYINSGSGAVMNAMETNLVG |
10 | 3fcsA | 0.17 | 0.13 | 4.17 | 1.00 | DEthreader | | GLGASVVSW--SDVIVACAPWQHWNVLEKTEEAEKTPVGSCFLAQPESGR-------R-AEYSPCRGNTLSDRYCEAGFSSVVTQAG-ELVLGAPGGYYFLGLLAQAPVA-DI----FSSYR-----------------LW-----------------HVSSQSLSFD-SS----NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAV-TD--V--NGDG-RHDLLVGA---------------VYLFLQPRPHALGAPLLLTLRSM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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