Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCSSSSCCCCCCCSSSSCCCCCCCCSSSSCCCCSSSSSSSSSSSCCSSCCCCCCCCCCCCCSSSSSSSSSSSSCCCCCCCCSSSSSSSSSSSCCCCCCCCCCSSSSSCCCCCCSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCSSCCCCCCSSSSSSSSSCCCCCCCCC MAAAGQLCLLYLSAGLLSRLGAAFNLDTREDNVFRSRPVINIQKTITVTPNRIDLRQKTACGAPSGICLQVKSCFEYTANPAGYNPSISIVGTLEAEKERRKSGLSSRVQFRNQGSEPKYTQELTLKRQKQKVCMEETLWLQDNIRDKLRPIPITASVEIQEPSSRRRVNSLPEVLPILNSDEPKTAHIDVHFLKEGCGDDNV |
1 | 1l5gA | 0.23 | 0.22 | 6.80 | 1.33 | DEthreader | | PSASSRMFLCDWSSRC-VLEGSFGYSMK--LILYRARPVITVNAGLEVYPSILNQDNKTCSTALKVSCFNVRFCLKADGKG-VLPRKLNFQVELLLDKLKQKG-AIRRALFLY-SRSPSHSKNMTISRGGLMQCEELIAYLRDSFRDKLTPITIFMEYRLDYRT-AA---DTTGLQPILNQFTPANISRQAHILLDCGEDNVC |
2 | 4g1eA | 0.23 | 0.22 | 6.81 | 2.01 | SPARKS-K | | EGQWAARMPPSFGYSMKGAPDLIVGAGVDRAILYRARPVITVNAGLEVYPSILNQDNK-TCTALKVSCFNVRFCLKADGKG-VLPRKLNFQVELLLDKLK-QKGAIRRALFL-YSRSPSHSKNMTISRGGLMQCEELIAYLRDEFRDKLTPITIFMEYRLDYRTAADT----TGLQPILNQFTPANISRQAHILL-DCGEDNV |
3 | 3vi3A | 0.19 | 0.14 | 4.60 | 1.29 | MapAlign | | ----------------------------------RGRPIVSASASLTIFPAMFNPEERSCLEGNPVACINLSFCLNASGKH--VADSIGFTVELQLDWQKQ-KGGVRRALFLAS-RQATLTQTLLIQ-NGREDCREMKIYLRNEFRDKLSPIHIALNFSLDP----QAPVDSHGLRPALHYQSKSRIEDKAQIL--------- |
4 | 3vi3A | 0.18 | 0.16 | 5.31 | 1.21 | CEthreader | | PLWAASHTPDFFGSALRGGRDLIVGFGVDKAVVYRGRPIVSASASLTIFPAMFNPEERSSLEGNPVACINLSFCLNASGKH--VADSIGFTVELQLDWQKQK-GGVRRALFLASRQ-ATLTQTLLIQNGAREDCREMKIYLRNEFRDKLSPIHIALNFSLDPQAPV----DSHGLRPALHYQSKSRIEDKAQIL--------- |
5 | 4g1eA | 0.24 | 0.23 | 7.07 | 1.65 | MUSTER | | GQWAARSMPPSFGYSMKGYPDLIVGAGVDRAILYRARPVITVNAGLEVYPSILNQDNKTC-TALKVSCFNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQK-GAIRRALFLYS-RSPSHSKNMTISRGGLMQCEELIAYLRDEFRDKLTPITIFMEYRLDYRTAA----DTTGLQPILNQFTPANISRQAHILL-DCGEDNV |
6 | 4g1eA | 0.22 | 0.21 | 6.67 | 4.16 | HHsearch | | EGQWAARSPPSFGYSMKGATDLIVGFGVDRAILYRARPVITVNAGLEVYPSILNQDNKT-CSLLKVSCFNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQ-KGAIRRALFLYSRS-PSHSKNMTI-SRGLMQCEELIAYLRSEFRDKLTPITIFMEYRLDYRTAA----DTTGLQPILNQFTPANISRQAHILL-DCGEDNV |
7 | 4g1eA3 | 0.24 | 0.18 | 5.52 | 1.72 | FFAS-3D | | -------------------------------------PVITVNAGLEVYPSILNQDNKTCSTALKVSCFNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQKGAI-RRALFL-YSRSPSHSKNMTISRGGLMQCEELIAYLRDEFRDKLTPITIFMEYRLDYRTA----ADTTGLQPILNQFTPANISRQAHI---------- |
8 | 3k71G | 0.10 | 0.09 | 3.47 | 1.30 | EigenThreader | | VLGPSISPSHSQRIAGSQLSSGGQDLTQQVLLLRTRPVLWGVSMQFIPAEIPRSAFECREQVVSEQTLVQSNICLYIDKRSKSRDLQSSVTLDLALD-----PGRLSPRATFQETKNRSLSRVRVLGLKAHCE--NFNLLLPSCVEDSVTPITLRLNFT----LVGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHIC |
9 | 4g1eA | 0.23 | 0.21 | 6.50 | 3.03 | CNFpred | | --------PPSFGYSMKGAPDLIVGAFVDRAILYRARPVITVNAGLEVYPSILNQD-NKTCSLLKVSCFNVRFCLKADGKGV-LPRKLNFQVELLLDKLKQ-KGAIRRALFLYS-RSPSHSKNMTISRGGLMQCEELIAYLRDEFRDKLTPITIFMEYRLDYRTAADT----TGLQPILNQFTPANISRQAHILL-DCGEDNV |
10 | 4g1eA | 0.23 | 0.22 | 6.81 | 1.17 | DEthreader | | VPSASSRMFLDWSSTRCL-GQWPFGAFGDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLALKVSCFNVRFCLKADG-KGVLPRKLNFQVELLLDKLKQKG-AIRRALFLYS-RSPSHSKNMTISRGGLMQCEELIAYLRDEFRDKLTPITIFMEYRLDYRT-AA---DTTGLQPILNQFTPANISRQAHILLCGNVCEGA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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