>P23219 (403 residues) PSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWESFS NVSYYTFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLER QYQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLML YATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLK FDPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVE ALVDAFSRQIAGRICHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFN IVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | PSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWESFSNVSYYTFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRICHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL |
Prediction | CCCCCSSSSCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCSCHHHHHHSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHCHHHHHHHHHCCCCCCHHHCCCCCCSHHHHCCCHHHHHHCCHHHHHHHHHHCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCC |
Confidence | 9963112102203301543124101012332221345677899876678888866322488766777778899632010022330201013689999300035665233555789998999986347998105545799657999999875455789998310210146435786357999999875543999999976999987899999999999999998799999998480110124874468988998983119999999842369832312778513888535814443269999999998660002366654432123214886421355437778974355432255134666644345689986126898436765888766676555776669 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | PSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWESFSNVSYYTFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRICHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL |
Prediction | 8535210000030111010012111341234202303553354243042634113122022431333244443110000010100011001013723452313200100001000336620440142430201023364431202256343303234314442001022312121000000000113202100430373236043430031012000000010000000110013523340415334114442202000000000110010153042235402033000204103532013002100422153144344222421242221110210213313205203223023431152044231440013105403100020153655644545544557 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCSSSSCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCSCHHHHHHSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHCHHHHHHHHHCCCCCCHHHCCCCCCSHHHHCCCHHHHHHCCHHHHHHHHHHCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCC PSPSFTHFLLTHGRWFWEFVNATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWESFSNVSYYTFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAMEFNHLYHWHPLMPDSFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRICHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVKTATLKKLVCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL | |||||||||||||||||||
1 | 3faqA | 0.18 | 0.17 | 5.59 | 1.33 | DEthreader | ---CDENSPYRTITGDCNNRRSLGARALARWL-PAEYEDGLALPFKTRNGFRVPLAREVSNKIVGYEGVLDQNRSLLFMQWGQIVDHDLDFAPGFVAREQINAVTSFLDASLVYGSEP-LASRLRNLPLGLMAVNAWDHGLAYLPFN--NKKPSPCEFIARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLG-SEMQKWIPP-YQGYNNSVDPRISNVFTFAFRGHMEVPSTVSRLPAELPLHTLFFNTWRIIDGGIDPLTRGLLAKKSKLMPMVERGRVG--PLL--ACLLGRQFQQIRDGDRFWWNPGVFTEKQRDSLQKFSFSRLICDNTIKVPLHAFQANNYPHDFVDCSTVDKLDL | |||||||||||||
2 | 1cqeB2 | 0.83 | 0.78 | 21.91 | 3.73 | SPARKS-K | PPTYNIAHDYISWESFSN-------VSYYTRILPSVPRDC-PTPMGTKGKKQLPDAEFLSRRFLRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLMPDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRICHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLNTKTCPYVSFHVP----------------- | |||||||||||||
3 | 3faqA | 0.18 | 0.18 | 5.73 | 2.00 | MapAlign | -VKCDENSPYRTITGDCNNRRLGAANRALARWLPAEYEDGLALPFGTRNGFRVPLAREVSNKIVGEEGVLDQNRSLLFMQWGQIVDHDLDFAPQSLAREQINAVTSFLDASLVYGSEP-LASRLRNLPLGLMAVNWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLG-SEMQKW-IPPYQGYNNSVDPRISNVFTFAFFGHMEVPSTVSRLEAELPLHTLFFNTWRIIDGGIDPLTRGLLAKKSKLMMVERGRVGPLLACL-----LGRQFQQIRDGDRFWWENVFT-EKQRDSLQKFSFSRLICDNTTKVPLHAFQANNYPHDFVDCSTVDKLDL | |||||||||||||
4 | 3faqA | 0.17 | 0.17 | 5.61 | 1.23 | CEthreader | LVKCDENSPYRTITGDCNNRRSGAANRALARWLPAEYEDGLALPFGWTNGFRVPLAREVSNKIVGYLDVLDQNRSLLFMQWGQIVDHDLDFAPQSLAREQINAVTSFLDASLVYGSEPLASRLNLSSPLGLMAVNWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPP--YQGYNNSVDPRISNVFTFAFRGHMEVPSTVSRLDEELPLHTLFFNTWRIIDGGIDPLTRGLLAKKSKLMMVERGRVGPLLACL-----LGRQFQQIRDGDRFWWENPGVTEKQRDSLQKFSFSRLICDNTTKVPLHAFQANNYPHDFVDCSTVDKLDL | |||||||||||||
5 | 1cqeB2 | 0.83 | 0.77 | 21.84 | 2.26 | MUSTER | PPTYNIAHDYISWESFSNV-------SYYTRILPSVPRDC-PTPMGTKGKKQLPDAEFLSRRFLRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLMPDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLNTKTCPYVSFHVP----------------- | |||||||||||||
6 | 3faqA | 0.18 | 0.18 | 5.80 | 3.97 | HHsearch | LVKCDENSPYRTITGDCNNRRSGAANRALARWLPAEYEDGLALPFKTRNGFRVPLAREVSNKIVGYLDLDQ-NRSLLFMQWGQIVDHDLDFAPETEAREQINAVTSFLDASLVYGSEP-LASRLRNLSSGLMAVNQDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSE-MQKWIP-PYQGYNNSVDPRISNVFTFAFRGHMEVPSTVSRLDAELPLHTLFFNTWRIIDGGIDPLTRGLLAKKSKLMMVERGRVGPLLACL-----LGRQFQQIRDGDRFWWEGVFT-EKQRDSLQKFSFSRLICDNTHKVPLHAFQANNYPHDFVDCSTVDKLDL | |||||||||||||
7 | 1cqeB2 | 0.77 | 0.75 | 21.14 | 2.96 | FFAS-3D | -SPSFIHFLLTHGRWLWDFVNATFIRDTLMRLVLTVRSNLIPSPPTYNIAHDYISWESFSNVSYRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLMPDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNI---------DHHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELLEELYGDIDALEFYPGLLLEKCHPNSIFGESM- | |||||||||||||
8 | 1cvuA | 0.48 | 0.44 | 12.92 | 2.18 | EigenThreader | MKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLS-----YYTRALPPVGNKELPDSKEVLEKVLLRREFIPDGSNMMFAFFAQHFTAQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGY-----HFKELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIE--DQEYKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRKYQSLNEYRKRFSLKPAPFSLKGLMGNPICSPQYWKPSTFGKIINTASIQSLICNNVKGCPFTSFNVQ----------------- | |||||||||||||
9 | 1prhA | 0.82 | 0.77 | 21.85 | 3.40 | CNFpred | PPTYNIAHDYISWESFSNV-------SYYTRILPSVPRDC-PTPMGTKGKKQLPDAEFLSRRFLLRFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHQRVCDLLKAEHPTWGDEQLFQTAKLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLMPDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRICHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLNTKTCPYVSFHVPDPR-------------- | |||||||||||||
10 | 7d3eA | 0.18 | 0.17 | 5.41 | 1.33 | DEthreader | ------SWEVQRFDGWYNNLMERWGGSRLQRLVPASYADGVYQPLG---EPHLPNPRDLSNTISRGALASLRNRTVLGVFFGYHVLSDLVSVSRWDETDPANQVTGWLDGSAIYGSSHSWSDALRSFSRGQLASGPD---PAFPRDSQNPLLMWAAPQNGPRGLYAFGAERGNREPFLQALGLLWFRYHNLWAQRLARQHPDWEDEELFQHARKRVIATYQNIAVYEWLPSFLQ--KT--LP-E-YTGYRPFLDPSISSEFVAASELSTMVPPGVYMQGVALRVCNSYWSREHLQSEDVDALLLGMASQIAEREDNA-GLESHDPGP-LFSTIVLEQFVRLRDGDRYWNTNGLFSKKEIEEIRNTTLQDVLVAVIIALQPNVFVWHK-GDPCP---------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |