Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC MPRCPAGAMDEGPVDLRTRPKAAGLPGAALPLRKRPLRAPSPEPAAPRGAAGLVVPLDPLRGGCDLPAVPGPPHGLARPEALYYPGALLPLYPTRAMGSPFPLVNLPTPLYPMMCPMEHPLSADIAMATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPASTSQPDPSPDRSANTSPESSSRLSSNGLLSASPSSSPSQSPPRDPPGFPMAPPNFFLPSPSPPAFLPFAGVLRGPGRPVPPSPAPGGS |
1 | 1n11A | 0.23 | 0.15 | 4.63 | 1.00 | DEthreader | | -----------------------------------------------------------------------HLPIVK---------L-----SPNVSNVETPLHMAARAGHTEVAKY--LLQNK-AKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN----ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD----AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAW-NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMG---------------------------KTKLGYSHQNEVSSDG---------------------S------------- |
2 | 1n11A | 0.24 | 0.19 | 5.91 | 2.65 | SPARKS-K | | ------------------------------LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE------TPLHMAARAGHTEVAKYLLQNKAKVN----AKAKDDQTP-LHCAARIGHLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK----EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN-KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPKRLGYISVTDVTDETSFVLHRMSFPETVDE---------------------------------------------- |
3 | 5et0A | 0.20 | 0.14 | 4.38 | 0.74 | MapAlign | | --------------------------------------------LEQALQAARRGDLDVLRSLHAAGLLDSLDALPVHHAARSGKLHCLRYLVEEVALPAVSRARNGATPAHDAAATGYLSCLQWLLVQEKDNSGATVLHLAARFGHPDVVKWLLYQG---GANSAITTDTGALPIHYAAAKGDLPSLKLLVGH-YGVNAQTNNGATPLYLACQEGHLEVTKYLVQECS---ADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSADVSFSEQDH-DGATAMHFAASRGHTKVLSWLLLHGAEI-SQDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------------------------------------- |
4 | 5et0A | 0.21 | 0.15 | 4.88 | 0.43 | CEthreader | | ---------------------SMALEQALQAARRGDLDVLRSLHAAGLLDSLDALPVHHAARSGKLHCL----------RYLVEEVALPAVSRARN--GATPAHDAAATGYLSCLQ--WLLTQGGCRVQEKDNSGATVLHLAARFGHPDVVKWLLYQ---GGANSAITTDTGALPIHYAAAKGDLPSLKLLVGHYEGVNAQTNNGATPLYLACQEGHLEVTKYLVQEC---SADPHLRAQDGMTPLHAAAQMGHNPVLVWLVSFADVSFSEQDHDGATAMHFAASRGHTKVLSWLLLHGAEIS-QDLWGGTPLHDAAENGELECCQILAVNGAGLDVRDHDGYTAADLAEFNGHTHCSRYLRTVQTLS-------------------------------------------------------------------------------------- |
5 | 6molA | 0.26 | 0.24 | 7.41 | 1.81 | MUSTER | | LGKKLLKAARAGQDDVRILMAN----GADVNATDIWDATPLHL-AALIGHLEIVEVL--LKNGADVNASTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMGHVEIVEVLLKYGADVNAQDAAGGTPLHEAARAGHLEIVEVLLKY-----ADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGA----DVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVD-AAGGTPLHEAARAGHLEIVEVLLKYGADVNAV----GTPLHKAARAGHLEIVEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARM-----------GHVEIVEVLLKYGADVNAQDKFGKT |
6 | 4oauC | 0.20 | 0.16 | 5.20 | 1.15 | HHsearch | | --------------------------------------------------------------------DNHLLIKAVQNEDVDLVQQLLEGGANVNF----QEEGGWTPLH-NAVQMSRLLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLS----KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKGGATALMDAAEKGHVEVLKILLEMGA----DVNACDNMGRNALIHALLSSDEAITHLLLDHGADVNVRG-ERGKTPLILAVEKKHLGLVQRLLEEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLLSHGAKEDFHPPEDWKPQSSHWGRIYRIGDEKYKIADTSEGGIYLG--FYEKQEVVEVSCLQSSRENSHLVTFYGSESHRGHLFVCVTLCEQT |
7 | 6molA | 0.26 | 0.24 | 7.34 | 2.87 | FFAS-3D | | -------AARAGQDDEV---RILMANGADVNATDIWDATPLHL-AALIGHLEIVEVLLKNGADVNASDITTPLHLAATMGHLEIVEVLLK----YGADVNAYDLNGATPLHLAARMGHEVLLKYGADVNAQDAAGGTPLHEAARAGHLEIVEVLLKY----GADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGA----DVNAVDAAGGTPLHEAARAGHLEIVEVLLKYGADVNAVD-AAGGTPLHEAARAGHLEIVEVLLKYGADVNAVG----TPLHKAARAGHLEIVEVLLKYGADVNATDIWDATPLHLAALIGHLEIVEVLLKNGADVNASDITGTTPLHLAATMGHLEIVEVLLKYGADVNAYDLNGATPLHLAARMG-----------HVEIVEVLLKYGADVNAQDKFGKT |
8 | 4rlvA | 0.17 | 0.16 | 5.29 | 1.30 | EigenThreader | | PLLARTKNGLSPLHAAQGDHLQHKAPVDDVTLDYLTRANPNARALNGFTPLHIACKKNRIKVEGASIQAITESGLTPIHVAAFGHGASPDVTNIRGETALHAARAGQVEVVRCLLRNGAL-------VDARAREEQTPLHIASRLGKTEIVQLLLQH-----AHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQ----RRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHA-TAKNGYTPLHIAAKKNQQ-IASTLLNYGAETNIVTKQGVTPLHLASQEGHTLLLDK-----GANIHSTKSGLTSLHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKVNFLLKQGANVNAKTKNGYTPLHQAAQQGHQHGAKPNATTANGNTALAIAKRLGYISVVDTLKVV |
9 | 4rlvA | 0.27 | 0.18 | 5.47 | 2.47 | CNFpred | | ---------------------------------------------------------------------LTPLHCAARSGHDQVVELLLERGAPLLAR----TKNGLSPLHMAAQG-VKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDK----RANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNG----ASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAR-EEQTPLHIASRLGKTEIVQLLLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPL--------------------------------------------------------------------------- |
10 | 4rlvA | 0.24 | 0.16 | 4.88 | 1.00 | DEthreader | | ----------------------------------------------------G---------------G-DQVPLHAAQGDHV---K--L--APVDDVTLDYLTALHVAAHRVTKLL-LD--KR-ANPNARALNGFTPLHIACKKNRIKV-ELLVKYG----ASIQAITESGLTPIHVAAF-GHLNIVLLLLQNGASPDVTNIRGETALH-AARAGQVEVVRCLLRNG----ALVDARAREEQTPLHIASRLGKTEIVQLLLQH-AHPDAATT-NGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHDQKALLLLEK--G-ASP-HATAKNG---------------------------VTKQGVTHQIHSTSGL--TK------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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