Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCSSHHHHHHHHHHHCCCSSSSCCCCCCSSCCCCCCCCSSSSSSCCCSSSSSCCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCCCCCCCCCCSSSSSCCCCCSSSSSCCCSSSSCCCSSSSCCCSSSCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCCSSSSCCCCSSSCCCCCCCCCSSSSSSCCCCCCSSSCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSCCCCCCCCCSSSSSSSCCCCCSSSSSSCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSCCCCCCCCCCCSSSSSSCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSCCCCCCCCCCCSSSCCCCCCCCCSSSSSSCCCCCCCCCCCCSSSSCCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSSSCCCCCSCC MTRTRAALLLFTALATSLGFNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
1 | 3v4pA | 0.32 | 0.31 | 9.19 | 1.50 | DEthreader | | ------------------YNVDT-ESALLYQGPHTLFGYSVVLHSHRWLLVGAPTANWAVINPGAIYRCRIGKNTCEQLQLGSPGEEDNQWLGVTLSRQPENGSIVTCGHRWKNIFYINKLPTGGCYGVPPDLRTELS-KR-IAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTN-KYKAFLDKNQVKFGSYLGYSVGAGHFSQTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFS-DLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMTNLVGSDKY-AARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRA-DGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFDSAVLL |
2 | 3k71G2 | 0.99 | 0.94 | 26.36 | 3.10 | SPARKS-K | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPREGTTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
3 | 3v4pA | 0.33 | 0.31 | 9.38 | 0.95 | MapAlign | | ---------------------VDTESALLYQGHNTLFGYSVVLHANRWLLVGAPTANWSVINPGAIYRCRIGGQTCEQLQLGCLEERDNQWLGVTLSRQPENGSIVTCGHRWKNIKNENKLPTGGCYGVPPDLRTELS--KRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFS-DLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMTNLVGS-DKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRAD-GISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFDSAVLL |
4 | 3v4pA | 0.33 | 0.31 | 9.26 | 0.64 | CEthreader | | -------------------YNVDTESALLYQGHNTLFGYSVVLHSHGWLLVGAPTANASVINPGAIYRCRIGKNTCEQLQLGSPEERDNQWLGVTLSRQPGNGSIVTCGHRWKNIFNENKLPTGGCYGVPPDLRTELSK--RIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGF-SDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRAD-GISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFDSAVLL |
5 | 3k71G2 | 0.99 | 0.95 | 26.55 | 2.54 | MUSTER | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
6 | 3k71G | 0.98 | 0.93 | 26.10 | 3.42 | HHsearch | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTSSRNDLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
7 | 3k71G2 | 0.99 | 0.95 | 26.55 | 3.43 | FFAS-3D | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
8 | 3k71G2 | 0.96 | 0.90 | 25.25 | 1.15 | EigenThreader | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLT---QRLPVSRQECPRESSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGLTQD---GLVDLAVGARGQVLLL |
9 | 3v4pA | 0.33 | 0.31 | 9.19 | 4.37 | CNFpred | | -------------------YNVDTESALLYQGPNTLFGYSVVLHSNRWLLVGAPTANASVINPGAIYRCRIGKNTCEQLQLG-LEERDNQWLGVTLSRQPGNGSIVTCGHRWKNIFYENKLPTGGCYGVPPDLRTEL--SKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHF-HTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNAD-GFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMENLVGS-DKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRA-DGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAV |
10 | 3k71G | 0.91 | 0.86 | 24.10 | 1.33 | DEthreader | | -------------------FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQL--TQRLPVSRQE-CPRDEGSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMS-P-TFINMSQNDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWDAVLYGEQGHP-WGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|