Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHCCCCCCCCSSCCCCSSSSSSCCCCCCCCHHHSSSCCCCSSSCCHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSCCCCCCCSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCHHHHHHHHHHCCCCCCCCCSSSSSCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQKYGVD |
1 | 6defA | 0.43 | 0.35 | 10.27 | 1.17 | DEthreader | | -------------------------------------AQPGGISDPNLIKLVNKLQDVF--GVNN-PIDLPQIVVVGSQSSGKSSVLENIVGRDLPRGQGIVTRRPLVLQLINRQSSNLEWGEFLH--LPQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTKVDLMDEGTD--VVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNKS--AYCGTPYLARKLNLILMMHIKQTLPDIKQ------------------- |
2 | 5uot0 | 0.77 | 0.67 | 19.10 | 1.97 | SPARKS-K | | --------------------------------------------YEQKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKK-QPCEAWAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRCGAD |
3 | 6defA | 0.40 | 0.35 | 10.39 | 1.24 | MapAlign | | --------------------------------------LAQPGGISPNLIKLVNKLQDVFTTVGVNNPILPQIVVVGSQSSGKSSVLENIVRDFLPRGQGIVTRRPLVLQLINRQSNLDEWGEFLH-LPGQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTKVDLMDEGTD--VVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNKS--AYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQELEAL--- |
4 | 6defA | 0.41 | 0.37 | 10.86 | 0.84 | CEthreader | | -----------------------------------TLAQPGGISDPNLIKLVNKLQDVFTTVGVNNPIDLPQIVVVGSQSSGKSSVLENIVGRDLPRGQGIVTRRPLVLQLINRQSSDLDEWGEFLHLPGQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTKVDLMDEGTD--VVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNKSAY--CGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQELEALGPS |
5 | 4whjA1 | 0.77 | 0.64 | 18.17 | 1.80 | MUSTER | | --------------------------------------------YEQKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALP-----VTRCPLVLKLKKQPCEA-WAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGIT-------PRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRC--- |
6 | 5uot0 | 0.77 | 0.67 | 19.10 | 2.17 | HHsearch | | --------------------------------------------YEQKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKQP-CEAWAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRCGAD |
7 | 5uot01 | 0.77 | 0.67 | 19.10 | 3.28 | FFAS-3D | | --------------------------------------------YEQKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKQPCEA-WAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYPLKKGYMIVKCRGQQEITNRLSLAEATKKEITFFQTHPYFRVLLEEGSATVPRLAERLTTELIMHIQKSLPLLEGQIRESHQKATEELRRCGA- |
8 | 6defA | 0.40 | 0.36 | 10.56 | 1.17 | EigenThreader | | -----------------TLAQPGGISD------------------PNLIKLVNKLQDVFTTVGVNNPIDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGGIVTRRPLVLQLINRQSSNLDEWGEFLHLPGQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTKVDLMDEGTD--VVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNK--SAYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQELEALGPS |
9 | 4p4sB | 0.99 | 0.85 | 23.92 | 2.27 | CNFpred | | --------------------------------------------------PCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPSLAEKLTSELITHISKSLPLLENQIKETHQRITEELQKYGGD |
10 | 6jtgA | 0.24 | 0.20 | 6.17 | 1.17 | DEthreader | | -------------------------------------------------SL-IDMYSEVLDVLSDTQDHLPRVVVVGDQSAGKTSVLEMIAQARFPRGGEMMTRSPVKVTLSE-GPHH-VALFKD----SSREFDLLALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAKNVASPSRIQQIIKLFPMKALGYFAVVTGKG--NS-SESIEAIREYEEEFFQNSKLLKSMLKAHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATR-FN-LE------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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