>P20273 (87 residues) PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTK DQSGKYCCQVSNDVGPGRSEEVFLQVQ |
Sequence |
20 40 60 80 | | | | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ |
Prediction | CCSSSSSCCCCCSSCCCCCSSSSSSSCCCCCCCCSSSSSSCCSSCCCCCCCSSSSCCCCHHHCSSSSSSSSSCCCCCSSSSSSSSSC |
Confidence | 973899379971984894399999973789999779999999993679954899865697778799999991898634436999979 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ |
Prediction | 861625141763415445614642515655244440332346540577743404046045734566334040733563055146538 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCSSSSSCCCCCSSCCCCCSSSSSSSCCCCCCCCSSSSSSCCSSCCCCCCCSSSSCCCCHHHCSSSSSSSSSCCCCCSSSSSSSSSC PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||||||||
1 | 5vkjA | 0.86 | 0.85 | 23.95 | 1.50 | DEthreader | KHPKLEIKVSDAIVREGDSVTMTCEVSSNPE-YTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
2 | 5vkjA2 | 1.00 | 1.00 | 28.00 | 1.22 | SPARKS-K | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
3 | 7k0xD1 | 0.18 | 0.17 | 5.61 | 0.45 | MapAlign | -GVALEQRPISITRNAKQSASLNCKILN---PVSYVHWYRSPERLLVYDTCRLIVSDLQVSDSGVYHCASWDGRVKVFGEGTRLIVT | |||||||||||||
4 | 7k0xD1 | 0.18 | 0.17 | 5.63 | 0.33 | CEthreader | TGVALEQRPISITRNAKQSASLNCKILN--PVSDYVHWYRSPERLLVYSRCRLIVSDLQVSDSGVYHCASWDGRVKVFGEGTRLIVT | |||||||||||||
5 | 5vkjA2 | 1.00 | 1.00 | 28.00 | 1.33 | MUSTER | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
6 | 3p3yA | 0.24 | 0.23 | 7.17 | 0.40 | HHsearch | AAPYWLDEPKNLILAPGEDGRLVCRAN-GNPKPT-VQWMVNGEPLQSAPGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN-AFVSVL | |||||||||||||
7 | 5vkjA2 | 1.00 | 1.00 | 28.00 | 1.67 | FFAS-3D | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
8 | 5vkjA2 | 0.90 | 0.90 | 25.21 | 0.28 | EigenThreader | HTPKLEIKVSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
9 | 5vkjA | 1.00 | 1.00 | 28.00 | 1.60 | CNFpred | PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQ | |||||||||||||
10 | 6vi2A1 | 0.23 | 0.22 | 6.86 | 1.50 | DEthreader | SDIQMTQSPSSLSASVGDRVTITCRASQ--S-VSAVAWYQQPKLLIYSSRFTLTISSLQPEDFATYYCQQSVSGPLTFGQGTKVEIK | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |