>P19875 (107 residues) MARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQCLQTLQGIHLKNIQSV KVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGKSN |
Sequence |
20 40 60 80 100 | | | | | MARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGKSN |
Prediction | CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCCCHHHSSSSSSSCCCCCCCCCSSSSSSCCCCSSSCCCCCHHHHHHHHHHHHHCCCC |
Confidence | 97101055788745999999999999997653256456776116034368889335469999838999998179999738978966999789999999999851369 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGKSN |
Prediction | 74444444443323101022231010111331444533461203124336504363055051345345164330101035655210227262044005303756788 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCCCHHHSSSSSSSCCCCCCCCCSSSSSSCCCCSSSCCCCCHHHHHHHHHHHHHCCCC MARATLSAAPSNPRLLRVALLLLLLVAASRRAAGAPLATELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGKSN | |||||||||||||||||||
1 | 4ui9N | 0.05 | 0.05 | 2.11 | 1.00 | DEthreader | QLQILLLLSLERVSAEAVTTTLHQVTRERMEDRCRGESIVRDTLYCPIRRLRTR-EDTRQGLLAE----SSDII-----------SLLVSIYGKDLFINEYRSLLAD | |||||||||||||
2 | 1mgsA | 0.88 | 0.60 | 16.83 | 2.90 | SPARKS-K | ----------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
3 | 1mgsA | 0.90 | 0.53 | 14.97 | 0.89 | MapAlign | ----------------------------------------LRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNS---- | |||||||||||||
4 | 1mgsA | 0.88 | 0.60 | 16.83 | 0.79 | CEthreader | ----------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
5 | 1mgsA | 0.88 | 0.60 | 16.83 | 1.87 | MUSTER | ----------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
6 | 1mgsA | 0.88 | 0.60 | 16.83 | 1.92 | HHsearch | ----------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
7 | 1mgsA | 0.88 | 0.59 | 16.57 | 1.44 | FFAS-3D | -----------------------------------SVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
8 | 1f9pA | 0.48 | 0.36 | 10.60 | 0.77 | EigenThreader | ------NLAKGK-----------EESL------DSDLYAELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKKLA--GD- | |||||||||||||
9 | 1mgsA | 0.88 | 0.60 | 16.83 | 1.31 | CNFpred | ----------------------------------ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKSN | |||||||||||||
10 | 6yrfA | 0.06 | 0.05 | 2.07 | 0.83 | DEthreader | LKISNEQNQMNHVNAQLNAINSTLNIYLPKITSMLNVMNHLSQI-FHDMTLKTSELITEIGK-----------YNFL-----VLTQKRFRINILPT--LSN-NFGFT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |