Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSSSSSCCCCSSSSSSCCSSSSSCCCCSSSSSSCCSSSSSSCCSSSSSSCCCSSSSSSCCCSSSSSSSSSSCCCCCCCCCCCSSSSSCCCCCCCCCCSSHHHHCCCCCSSSSCCCCCCCCCCCCSSSSSCCSSSCSSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSSCCCCC DKPSEDSPPLEMLGPRRTFVLSALQPSPTHSSSNTQRLPDRVTGVDTDPHFIIHVPQKEDTLCFNINEEPGVILSLVQDPNTGFSVNGQLIGNKARSPGQHDGTYFGRLGIANPATDFQLEVTPQNITLNPGFGGPVFSWRDQAVLRQDGVVVTINKKRNLVVSVDDGGTFEVVLHRVWKGSSVHQDFLGFYVLDSHRMSARTHGLLGQFFHPIGFEVSDIHPGSDPTKPDATMVVRNRRLTVTRGLQKDYSKDPWHGAEVSCWFIHNNGAGLIDGAYTDYIVPDIF |
1 | 7a5oA3 | 0.12 | 0.09 | 3.22 | 1.13 | CEthreader | | --------------------------------------CPGTCALEGGSHITTF-----DGKTYTFHG-DCYYVLAKGDHNDSYALLGELAPCG----STDKQTCLKTVVLLADKKKNAVVFKSDGSVLLNQLQV-------NLPHVTASFSVFRPSSYHIMVSMAIGVRLQVQLAP----------VMQLFVTLDQASQGQVQGLCGNFLEGDDFKTASGLVEATGAGFANTWKAQSTCHDKLDWLDDPCSLNIESANYAEHWCSLLKKTETPFGRCHSAVDPAEY |
2 | 6tm2A | 0.15 | 0.07 | 2.36 | 1.21 | CNFpred | | -------------------------------------------ALEGGSHITTF-----DGKTYTFHGD--CYYVLAKGDNDSYALLGELAPCG------DKQTCLKTVVLLADKKKNAVVFKSGSVLLNQL--------QVNLPHVTASFSVFRPSSYHIMVSMAIGVRLQVQLAP--------VMQLFVTLDQA--SQGQVQGLCGNFN---------------------------------------------------------------------------- |
3 | 3pgbA | 0.05 | 0.05 | 2.26 | 1.03 | MapAlign | | -----------DETADVAKWLFGRPELNLTTTENAGEWDNTIALIELHAHVRLNNRTDPYFADILVGDTLDIWGIPLWQDDGRIIRWDMFWNMADDEFDSETLPLGLYLSDVTMDFSFYIAFNRDTLSLFDIKYELGLFGSYASYLNTSFDSLCLFVYFTLRSVSTIGNDYMFSYNFH----MDGTIGVEVRASGYIQSAGYQIHDSLSGSMGPNNTIELVSVWGFNGQTQLHVVNEPRGYRITVQVTRQNGESLNQTDLVVWLNLGMHHVPHTTAHSGVAFTPLN- |
4 | 7a5oA3 | 0.12 | 0.08 | 2.86 | 1.20 | HHsearch | | --------------------------------------CPGTCALEGGSHIT-----TFDGKTYTFHGD--CYYVLAKGDNDSYALLGELAPCGSTD----KQTCLKTVVLLADKKKNAVVFKSDSVLLNQLQ--VNLPHV------TASFSVFRPSSYHIMVSMAIGVRLQV--QL----AP--VMQLFVTL--DQASQGQVQGLCGNFNGLEG---DDFK------TASGLVEA-T----G-----AGFANTW-KA-QSTCHDKLDWIESAYAEHWCSLLKETPF |
5 | 7a5oA2 | 0.10 | 0.09 | 3.25 | 0.79 | CEthreader | | DDGRGGCVVEKECPCVHNNDLYSSGAKIKVDCNTCTCKRGRWVCTQAVCHGTCSIYGSGHYITFYYDFDGHCSYVAVQDYCGLGSFSIITENVPCGT---TGVTCSKAIKIFMGR--TELKLEDKHRVVIQRDEGH------------HVAYTTREVGQYLVVESSTGIIVIWDKR------------TTVFIKLAPSYKGTVCGLCGNFDHRSNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSICHSKVDPKPFY |
6 | 5n4aA | 0.10 | 0.09 | 3.49 | 0.77 | EigenThreader | | SKKTQAGGTDSRTGRVEKSIEGHKGAYDGTADGRNGMDSPVYSIYDCDQLCYCTG----SNVVIKSLSHDGVVLKVDWSPINHLIITGGEWDSFGRGLFDY---PVTSVAWAP-SGELFAVGGFNTLQLCMGWAYSKIHLNDTGTLSWTADAGGGGSDRVIKVSLGYGYLIVATAVYNTTNLGTPHIFDLFLLLDNSAGLNAQMITLSFDTVGEPWQHTLEQAGTINDRNRDLLLPVMAKLAADSARWH-------DSTAMLSAMVDYPSEVYVDKDLLAKTFGKSA |
7 | 7a5oA3 | 0.15 | 0.08 | 2.82 | 0.64 | FFAS-3D | | ---------------------------------------PGTCALEGGSHITT-----FDGKTYTFHGD--CYYVLAKGHNDSYALLGELAPC----GSTDKQTCLKTVVLLADKKKNAVVFKSDSVLLNQLQVNLPH--------VTASFSVFRPSSYHIMVSMAIGVRLQVQLAPVM----------QLFVTLDQASQGQVQGLCGNFNGLEG---DDFKTASGLVEATG------------------------------------------------------- |
8 | 6w4qA | 0.13 | 0.12 | 4.24 | 0.76 | SPARKS-K | | NADRVNPFMFGALGGSNDVDSGKATQLTDAHYVSNIQLKYNTSS--------IYGSGLHYSR-LHQLPSATGNCITIKDTCSLIVLDAGVYGT--GAQQGTSFTA-GTTGIYVETPRRDLCISKVHIALNIDSGNFSVTTDSTTDWTWTNIQVNTCGKQCL--VLDGCGNGRIIGGKFWQPYGTVGQFPGITINNSQNINGGGNGI--EISESYSISMNGLNNGINANNTFYNIVFNKSDAVINGFVGLNYAANSGSGANSSAGNFQFDCSVTINGVVTGYMGINFI |
9 | 5c2vB | 0.08 | 0.06 | 2.18 | 0.99 | CNFpred | | -----------------------------------------------QPEASAVTPD-GAFLYVCNAE--SDSVSVVDIQ--RKQEIKEIKVG----------DWPSGIKISPDGKTAYVACSGNAIDVID-YGPRMVEISKTLVAILDTRSVDFIDRVVENRVIHESSNLRDVVYTP------DGKYIAVTHQTPKN-GQVFTNNVTIIETGKVARLPLDDLNNYDGNPYGMAMDPGKYLYIGVRG----------MHRVTILDMDKVLGLVR------------- |
10 | 7a5oA | 0.09 | 0.06 | 2.36 | 0.83 | DEthreader | | ---------G------------YTPGCNRWVCKDL-C-GTCA-LEG--GSHITTF--D-GKTYTFHGD---CYYVLAKGDHDSYALLGELAPCGS----TDKQTCLKTVVLLADKKKNAVVFKSDGSVLL-N-QLQVN-----LPHVTASFSVFRPSSYHIMVSMAIGVRLQVQLAP---------VMQL-FVTLDQASQGQVQGLC-GNFNGLEGD----------------F-KTASGLVEA-------------------TGAGFANT--WKAHDKLDW--E-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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