>P19525 (126 residues) RFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA EREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQ MEFCDK |
Sequence |
20 40 60 80 100 120 | | | | | | RFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK |
Prediction | CCCCCCCCCCCCCCCCCHHHHCSSSSSSSSCCCSSSSSSSSCCCCCSSSSSSSCCCCHHHHHHHHHHHHCCCCCSCSSCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHSHHCCCC |
Confidence | 999787877766532213340203335432178499999986799499999972681899999999998599968026317873232532111222333356545667654211113100102489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | RFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK |
Prediction | 847457475363434431464064044026222040120323455320000204366740331040045161510030320023343444434433444444465454455442310000013478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCHHHHCSSSSSSSSCCCSSSSSSSSCCCCCSSSSSSSCCCCHHHHHHHHHHHHCCCCCSCSSCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHSHHCCCC RFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK | |||||||||||||||||||
1 | 2wb8A | 0.18 | 0.14 | 4.64 | 1.00 | DEthreader | -------ECSQPVPFSHCLPEKLRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIETEEILPEIIISKELLTEGFIGLNSVHCVQGSYPP------------------FFKDDQLFIVLEFEFGGL | |||||||||||||
2 | 2a1aB1 | 0.96 | 0.74 | 20.70 | 1.69 | SPARKS-K | ---------GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS-----------------RSKTKCLFIQMEF--- | |||||||||||||
3 | 2a1aB | 0.97 | 0.74 | 20.69 | 0.42 | MapAlign | -----------HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDP-----------------ETSSRSKTKCLFIQMEFC-- | |||||||||||||
4 | 2a1aB | 0.97 | 0.77 | 21.58 | 0.38 | CEthreader | ---------GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS-----------------SRSKTKCLFIQMEFCDK | |||||||||||||
5 | 2a1aB1 | 0.97 | 0.75 | 20.91 | 1.81 | MUSTER | ---------GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS-----------------SRSKTKCLFIQMEF--- | |||||||||||||
6 | 3hx4A | 0.23 | 0.17 | 5.48 | 0.65 | HHsearch | DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKDKESLLREVQLLKQLDHPNIMKLYEFFED-----------------------------KGYFYLVGEVYTG | |||||||||||||
7 | 6cthA1 | 0.23 | 0.17 | 5.48 | 1.42 | FFAS-3D | ------MRKFSLNELAKVTSNFNAENKLGEGGFGSVYRGFLRDSDTYIAVKKVSRASKEYASEVKIISRLRHKNLVKLIGWCHEYEFMANGSLDSHIFKGKSL----------------------- | |||||||||||||
8 | 3q5iA | 0.20 | 0.15 | 4.83 | 0.50 | EigenThreader | QGIAINPGMYVRKKEGKIGESYFKVRKLGS--YGEVLLCKEKNGHSEKAIKVIKKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-----------------------------YFYLVTEFYEG | |||||||||||||
9 | 1koaA | 0.21 | 0.13 | 4.29 | 1.71 | CNFpred | ----------------HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTDKETVRKEIQTMSVLRHPTLVNLHDAFED-----------------------------DNEMVMIYEFMSG | |||||||||||||
10 | 2ozaA | 0.23 | 0.17 | 5.22 | 1.00 | DEthreader | -------GLQIKKNA--IIDDYKVTQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRAQCPHIVRIVDVYENLY-A------------------------GRKCLLIVMECLDG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |