Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCC ILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTVEPDAIKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGEQDYDYLNDWGPRFKKLADMYGGGDD |
1 | 3ifqC | 0.62 | 0.32 | 9.09 | 1.08 | FFAS-3D | | --------------------------------------------------------------------------RNDVAPTL-MSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGGEAASLSL--------NSDQDYDYLNEWGNRFKKLADMYGGG-- |
2 | 3ifqC | 0.64 | 0.33 | 9.41 | 1.34 | MUSTER | | ------------------------------------------------------------------------VTRNDVAPTL-MSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGG--EAASLS-------NSDQDYDYLNEWGNRFKKLADMYGGG-- |
3 | 3ifqC | 0.71 | 0.36 | 10.35 | 4.20 | HHsearch | | ------------------------------------------------------------------------VTRNDVAPTMSVPQYRPR--PANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGG--EAASLS-LNS-----DQDYDYLNEWGNRFKKLADMYGGG-- |
4 | 5oqlA | 0.05 | 0.05 | 2.40 | 0.39 | CEthreader | | SKDQETIYTVSKDGAVFEWKYWRIVNKHFFMQNAATLRCAAYHAESNLLVAGFSNGIFGLYEMPDFNLIHTLSISQNEIDFVTINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDAMNSLVYSPDGQRIVTAADDGKITFTEHTSGVTACEFAKKGSVLFTASLDGSV |
5 | 4l9pA | 0.06 | 0.06 | 2.72 | 0.52 | EigenThreader | | KVALKHDFLMEMFAQDVWTYRHWLVRHFKLWDHPREIQDVEALLKADVRNNSAWNHRYMLRFGPRDENEFDAGLHNTTGPSSEKGRLPVVDEDLVDSELQYSQSRILEAVLQAAGRPLSEWKDFARSFVVKSSHAIEWLADVYAEEDGEAVKMLTLLKEKWEYRIRQITASAA |
6 | 4r11B | 0.31 | 0.06 | 1.75 | 0.43 | FFAS-3D | | ----------------------------------------------------------------------------------------------------HELNSKIKDLETDQNAAPYDELRIYDDERDNI----------------------------------------- |
7 | 4btgA | 0.09 | 0.08 | 3.12 | 0.87 | SPARKS-K | | QLRSNLALFIAYQDMVKQRGRAEVIFSDEETIIPSEVSPFKLRGQTSMGQPSHVVVYEDWQFAKEVKLANNSNQRFLDVEPGSDRMSATLAPIGNTFAVSAFVKNRTAVY----EAVSNGAEMTLGF-------PSVVERDYALDRDPMVIAALRTGIVDLKRSMFNYYAAVM |
8 | 3ifqC | 0.78 | 0.36 | 10.14 | 0.99 | CNFpred | | ------------------------------------------------------------------------------------PQYRPRPANP--DEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGMGMEAASLMSLNS-----DQDYDYLNEWGNRFKKLADMYGGG-- |
9 | 3feyA | 0.05 | 0.05 | 2.09 | 0.83 | DEthreader | | G--EAMIRLKESLNNYNEAPMKELPAPPIDTCDRFINSPKFVRELEMPANPTCI-Y-KYGNHSALCLVAFKSK------------------LKDVPLKIEVFVQTLLAHSFSLA--QMIAVL-WI--SELSRDFTRLFVWEILSTRKMLFIQRFIMILYNCIERLQQIQHIIQ |
10 | 1rw9A | 0.09 | 0.09 | 3.34 | 0.74 | MapAlign | | -CQGIIIRSLAGEDPTKLNHAVAGLSQVWQYVTSGDGIFRDGSFIQHSTTPYTGSYGVRSIFFDAVEGSFAPVMINGAMADAVRGRSISREANTGYDLGASAIEAILLLHRGPGWALSLPADEWSGATALGEVAAVGQHLVGPGRTGLTARKSWFVSGDVTVCLGADISTASG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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