>P19022 (132 residues) LTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQELVRIRSD RDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAVDINGNQ VENPIDIVINVI |
Sequence |
20 40 60 80 100 120 | | | | | | LTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAVDINGNQVENPIDIVINVI |
Prediction | CCCCCCCCCCCCSSSSCCCSSCCCCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSCCCSSSSSCCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSC |
Confidence | 986644446650589813231489997533223445675899578999865899887389999945999998089999977618992996299985645886676799999999799996332589999989 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | LTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAVDINGNQVENPIDIVINVI |
Prediction | 765754655462543332442376564242343512333030334354333332330322536614030203264366534320302562030203340334436404020203057455255505040536 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCSSSSCCCSSCCCCCCCCCCCCCCCCCCSSSSCCCCCCSSSSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSCCCSSSSSCCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSC LTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAVDINGNQVENPIDIVINVI | |||||||||||||||||||
1 | 6cv7A | 0.16 | 0.14 | 4.78 | 1.17 | DEthreader | ------LN-EDLGPMFLP-CV--L-VPTRDC--RPLTYQAAIPELRTPELNPILVPIQAIDRPRPGILYSILVGTP-EDYPRFFHMHPRTAELTLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEIL | |||||||||||||
2 | 1ff5A1 | 0.57 | 0.43 | 12.42 | 1.64 | SPARKS-K | --------------------------------MDWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVT | |||||||||||||
3 | 6vfvA | 0.16 | 0.12 | 4.04 | 0.39 | MapAlign | -----------------------------DNAPLFPVYEVSVRENNP--PGAYLATVADDLGRNGQVTYRLLAEVAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVL | |||||||||||||
4 | 5i8dA2 | 0.19 | 0.15 | 4.88 | 0.30 | CEthreader | --------------------------NDSRPEFLNPIQTVSVLESA--EPGTIIANVTADLDLNPKLEYHIISIVAKDDQEDAFAVNINTGSVMVKSPLNRELVATYEVTLSVIDNASSVSVPNAKLTVNIL | |||||||||||||
5 | 3q2vA1 | 0.58 | 0.43 | 12.41 | 1.49 | MUSTER | ---------------------------------DWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVT | |||||||||||||
6 | 1ff5A1 | 0.57 | 0.43 | 12.42 | 0.84 | HHsearch | --------------------------------MDWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVT | |||||||||||||
7 | 1ff5A1 | 0.58 | 0.43 | 12.41 | 1.80 | FFAS-3D | ---------------------------------DWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVT | |||||||||||||
8 | 5sznA | 0.13 | 0.13 | 4.46 | 0.55 | EigenThreader | PVREDAPPGTNPSLLTAQILDREKASADINDNPPQTSYSVYLPENN--PRGTSIFSVHDPDDEENAKVTYSLVENTIQGAPSYVSINSDTGVLYALQSFDYEQFQNLQMQVKASDNGHPPLSSNVSLSVFLL | |||||||||||||
9 | 2omxB | 0.55 | 0.42 | 12.22 | 1.63 | CNFpred | -------------------------------LGSWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVT | |||||||||||||
10 | 3ubfA | 0.23 | 0.19 | 5.94 | 1.17 | DEthreader | ------QLDME-----------TPEERLSIRAQFMPSYEAEIPENQ-K-KDSDIISIKAKSFADREIRYTLKAQG--QGAG-TFNIGPTSGIVKLAKELDFELPHVYSLIVTATEDSGGF-STSVDLTIRVT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |