Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCSCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCSSSSSSCCHHHHCCCCSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSCCSSSSSCSCC MHVRSLRAAAPHSFVALWAPLFLLRSALADFSLDNEVHSSFIHRRLRSQERREMQREILSILGLPHRPRPHLQGKHNSAPMFMLDLYNAMAVEEGGGPGGQGFSYPYKAVFSTQGPPLASLQDSHFLTDADKATEVHFRSIRSTGSKQRSQNRSKTPKNQEALRMANVAENSSSDQRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGCH |
1 | 1vt4I3 | 0.05 | 0.05 | 2.32 | 0.69 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 6xp5N | 0.10 | 0.09 | 3.31 | 0.55 | EigenThreader | | NGNGSHSTTLRWINDMNLALHARLQLEEHDKLPPPFKNYTIDSGRFTLTQKIAHRQAIALNKGRWANSEKLNRNLGIGVHP----------SYLMVQWFREGVEQFIDIPFSQEKLSIEEILEFVTAKHVGYLLFSLFRKFDGKPLELNVWTQKPEDYYISVLKAQGKSHGWSVETFQAAWTRFVDWDP-----------QYAMRSMSLATKMAPCFSEERLSRRLIAEITNLRELYPGITPSQLRQPPVLKDPVWLIYRGSPQQKRTQPVLDV-----FE |
3 | 3rjrA | 0.21 | 0.17 | 5.55 | 1.54 | FFAS-3D | | --------------------------------------KTIDMELVKRKRIEAIRGQILSKLRLASPPSQG-DVPPGPLPEAVLALYNSTRDRVAGEPEADYYAKEVTRVLMVESGNQIYDKFTGVVRQWLTRREAIDNTLHVEINGDLATIHGMNRTPLERAQHALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWS---LDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKV-EQLSNMIVRSCKC- |
4 | 5ntuA | 0.26 | 0.21 | 6.37 | 2.06 | SPARKS-K | | -------------------------------------------QNTKSSRIEAIKIQILSKLRLETAPNISKDLPKAPPLRELIDQYNKVVKLIKPMKDGTRYTGIRSLKLNPGTGIWQSIDVKTVLQNWLAAGHDLTFPGPGEDGLNTDTPKRSRRDFGL--------DCDEHSTESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEF---VFLAAYPHT---HLVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS |
5 | 2r53A | 0.87 | 0.32 | 9.01 | 1.38 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH |
6 | 6w1sR | 0.05 | 0.04 | 1.73 | 0.67 | DEthreader | | VKSCLAAFRQSAVGLLPPRGVDYKGVRNLPAYFAVTANLKGPDLFEPQTALLRYVL---------EQPYSRDMVCNMQ------SS------------------HVTDFFTGSDSIQGTWCKDILQI-PHNWATNPQRTDFVYEFSTSAGGQQL--------NKCIEILNDMVLLCLASHEA------------------FLPFDIVFELLPVSKSLETLLGPYLYKKLVHAIIGLHAMNARE--DNPWEYYLIRLFPNCDWRFNEFPHA--VTVELMAL- |
7 | 2pffB | 0.07 | 0.07 | 2.81 | 1.05 | MapAlign | | --YLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGEL-RSYLKGATGHSQGLVTAVAIASLENNEGVPSLVNGAKNLVVSGPQSLYGLNLTLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGG |
8 | 5ntuA | 0.26 | 0.21 | 6.59 | 1.38 | MUSTER | | -------------------------------------------QNTKSSRIEAIKIQILSKLRLETAPNISKLLPKAPPLRELIDQYDEDDDYHATTPMKDGTRYTGIRSLKLDMNPGTGIDVKTVLQNWLAAPALDENGHDLAVTFPGPGEDGLNTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVF---LAAYPHTH---LVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS |
9 | 3rjrA | 0.25 | 0.21 | 6.52 | 3.71 | HHsearch | | -------------------------PLST--------SKTIDMELVKRKRIEAIRGQILSKLRLASPPSQGDV-PPGPLPEAVLALYNSTRDRVAGEPEADYYVTPHSLYML----FNTSELRPVLLSRAELKLEQYLRLLASSVRQRREAIEGFHGMNRPRAQHALDTNYCFSSTEKNCCVRQLYIDFRDLGW-KWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRK-PKVEQLSNMIVRSCKCS |
10 | 3rjrA | 0.17 | 0.17 | 5.50 | 0.57 | CEthreader | | PLPEAVLALYNSTRDRVAGEPEADYYAKEVTRVLMVESGNQIYDKFKGTPHSLYMLFNTSELREAVPEPVLLSRAELRLLRLKLKVEQHVELYQKYSQDSWRYLSNRLLAPSDSPEWLSRLSAHCSCDSKDNTLHVEINGDLATIHGMNRPFLLLMATPLERAQHALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGR-KPKVEQLSNMIVRSCKCS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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