>P17947 (270 residues) MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHS EFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQ YPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLL RSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGE VKKVKKKLTYQFSGEVLGRGGLAERRHPPH |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHSEFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGLAERRHPPH |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHCCCCCCSSSSSCCCCCSSSSSSCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCSSSCCCSSSSSSCCCHHHHCCCCCCCCCCC |
Confidence | 984112578877788744577788532479998888887889998886777788877888778999777776545788878988888887878778889899887888887878888772899899898865344777899877777666777897566777678899701899999998196657715874489836999847989999986241289988869999999999986084575285679995665555235554578999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHSEFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGLAERRHPPH |
Prediction | 734315154232321336522324162254334531322436463334331424353344424324653134233241433523233242443342435332344324462433343233434333423234455444543435344444442444243334444564412013002300536624410203457312020235325200421254355455141640041024116541054164400020044136324157543358 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHCCCCCCSSSSSCCCCCSSSSSSCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCSSSCCCSSSSSSCCCHHHHCCCCCCCCCCC MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHSEFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGLAERRHPPH | |||||||||||||||||||
1 | 1pueF | 0.99 | 0.33 | 9.13 | 1.16 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVKKKLTYQFSGEVL------------- | |||||||||||||
2 | 1pueF | 0.99 | 0.33 | 9.13 | 2.19 | SPARKS-K | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVKKKLTYQFSGEVL------------- | |||||||||||||
3 | 2h3wA | 0.09 | 0.09 | 3.27 | 0.72 | EigenThreader | RPPTVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTEDGSCGMHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESSLLGRTDTIRSASIDSLAFVKGMGDSTVLLRKAVQAHRAYTDRAIRGEAF---------DRHLLGLKLQAIEDLVSMP | |||||||||||||
4 | 1pueE | 0.99 | 0.32 | 9.03 | 1.95 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVKKKLTYQFSGEV-------------- | |||||||||||||
5 | 4bedA | 0.06 | 0.05 | 2.04 | 0.83 | DEthreader | ---------------------------N-LVRKSGLPYWD-LPSLAADYVDRFKVKPTHLMES-L-HNAIHYVGGMIFLHHSNVDRIFAIWQRQDPKAMDCAQLHKTPDLFYDYTLNLPELYLDERSRAEKGF---TDPPV-----TYRCPRPDAKDRYACCVHM-IFHWHRLFVTQVEDALVRGAT-IGI--------PYWDWEPMHIPGLAGNHSHTKRTLFYFHHSNVDRLWAV---WQALQ----YDYENVLH------------- | |||||||||||||
6 | 1pueF | 0.99 | 0.33 | 9.13 | 1.22 | MUSTER | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVKKKLTYQFSGEVL------------- | |||||||||||||
7 | 6lyqA | 0.07 | 0.07 | 2.79 | 0.95 | MapAlign | FGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIKWVVLGRTRWGYGNFYA-GGSSTVRGFQSNTIGMAVASLEFRTSFFWDMGTSNIRMSAGIALQWMSPLGPLVF--- | |||||||||||||
8 | 1pueF | 0.99 | 0.33 | 9.13 | 3.80 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVKKKLTYQFSGEVL------------- | |||||||||||||
9 | 2daoA | 0.33 | 0.12 | 3.67 | 1.05 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIV--DPNGLARLWGNHK-NRTNMTYEKMSRALRHYYKLNIIRKEPQRLLFRFMDEIMSGRTDR------- | |||||||||||||
10 | 1gvjB | 0.25 | 0.12 | 3.79 | 2.03 | SPARKS-K | -------------------------------------------------------------------------------------------------------------------------------------MNHKPKGTFKDYVRDRADLNKDKPVIPAAAYTGSGPIQLWQFLLELLTDKSCQSFISWTGD-GWEFKLS--DPDEVARRWGKRKN-KPKMNYEKLSRGLRYYYDKNIIHKTAKRYVYRFVCDLQSLLGYTPEELHAM | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |