>P17026 (224 residues) MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTEC EKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESF KQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSS HLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR |
Prediction | CCCCCCCCCCSSCCCCCCHHHHCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCHHHSCCCCCCCCCSCCCCCCCSSCCCCCHHHHHCCSCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSCCCC |
Confidence | 98776887753345544033322316878867886354556532204237998812687886514433302210320589981069888753443341101032158999126878775144334100013216999911787877404532312100330589990279888742443340120021169888546885422324320103447989813239 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR |
Prediction | 65162554122014324044032212243137212202341404212303343325367311203331304403231113231447621110333140440322111023144753210123313034032211102314475211102331303413231110231447542101233130341323134333250222003341404212302113424568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCSSCCCCCCHHHHCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSCCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCHHHSCCCCCCCCCSCCCCCCCSSCCCCCHHHHHCCSCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSCCCC MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFSRLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRTHTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRKSVAGLR | |||||||||||||||||||
1 | 5v3jE | 0.39 | 0.32 | 9.38 | 1.00 | DEthreader | -------------DEKCF----FMRPS-HLL---RHQRIRYDTQLSLHLLTHARFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYE-KCGKTFG--RG---------------- | |||||||||||||
2 | 5v3jE | 0.37 | 0.35 | 10.49 | 5.46 | SPARKS-K | RVHTDEKKECGKAFMRPSHLLRRIHTGEKPKECGKAFRYDTQLSLHLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECCGKTFGRGSELSRHQKIHT-------- | |||||||||||||
3 | 5v3jE | 0.37 | 0.35 | 10.48 | 1.13 | MapAlign | ---ECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH------- | |||||||||||||
4 | 5v3jE | 0.38 | 0.36 | 10.73 | 0.80 | CEthreader | KCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYEECGKTFGRGSELSRHQKIHT-------- | |||||||||||||
5 | 5v3gD | 0.52 | 0.39 | 11.23 | 3.45 | MUSTER | ------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCCGRGFRNKSHLLHQRTHT--------- | |||||||||||||
6 | 5v3jE | 0.38 | 0.36 | 10.73 | 1.67 | HHsearch | AQLSLHHEKCFECKECGKAFMRPSEKPHKCKECGKAFRYDTQLSLLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECCGKTFGRGSELSRHQKIHT-------- | |||||||||||||
7 | 5v3jE | 0.36 | 0.36 | 10.76 | 2.35 | FFAS-3D | -PHKCKECGKAFHTPSQLSHHQKLHVGEKPYECGKAFPSNAQLSHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCCGKSFTCTTELFRHKVHTGDRPHKCKE | |||||||||||||
8 | 5v3gD | 0.49 | 0.37 | 10.62 | 1.25 | EigenThreader | ------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYRECGRGNKSHLLRHQRTHT---------- | |||||||||||||
9 | 5v3gA | 0.55 | 0.39 | 11.19 | 5.87 | CNFpred | --------------------------------------------------SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRGRGFRNKSHL---------------- | |||||||||||||
10 | 2i13A | 0.50 | 0.33 | 9.71 | 1.00 | DEthreader | --------------------FSR-SDH-----------LAEHQRTHK-----P-YKCPE-CGKSFSDKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT-H---------------------------------- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |