Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCSSSSCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC EFNPCEDIMGYKFLRIVVWFVSLLALLGNVFVLLILLTSHYKLNVPRFLMCNLAFADFCMGMYLLLIASVDLYTHSEYYNHAIDWQTGPGCNTAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKIRLRHACAIMVGGWVCCFLLALLPLVGISSYAKVSICLPMDTETPLALAYIVFVLTLNIVAFVIVCCCYVKIYITVRNPQYNPGDKDTKIAKRMAVLIFTDFICMAPISFYALSAILNKPLITVSNSKILLVLFYPLNSCANPFLYAIFTKAFQRDVFILLSKFGI |
1 | 2ks9A | 0.17 | 0.17 | 5.55 | 1.50 | DEthreader | | DDQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNE----WYYGL---FYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP-LQPR-LSATATKVVICVIWVLALLLAFPQGYYSTTETMRVVCMIEPEHPNYEKVYHICVTVIYFLPLLVIGYAYTVVGITLWSESDRYVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPYLKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF |
2 | 6me6A2 | 0.20 | 0.19 | 6.17 | 2.22 | SPARKS-K | | --DGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDG--------WAFGEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLEYRIYSCTFIQTAST--QYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQAR--LKPSDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPEMAIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRILLALWN |
3 | 2ziyA | 0.18 | 0.17 | 5.63 | 0.61 | MapAlign | | ----QVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLK-------KWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLLCNCSFDYSRDSTTRSNILCMFIGFFGPILIIFFCYFNIVMSVSRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISPWVLTCCQ |
4 | 3dqbA | 0.17 | 0.17 | 5.55 | 0.33 | CEthreader | | PQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH-------GYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPECSCGIDYYTPHNNESFVIYMFVVHIIPLIVIFFCYGQLVFTVKEESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN |
5 | 6me6A2 | 0.20 | 0.19 | 6.09 | 1.68 | MUSTER | | --DGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWAFGE-------EHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARLKP--SDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPQEMIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRILLALWN |
6 | 6kp6A | 0.18 | 0.17 | 5.51 | 1.33 | HHsearch | | -------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKG--------YWPLGAVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVPDNQCFAQFLSN---PAVTFTAIAAFYLPVVIMTVLYIHIYLASRSRVHGMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCI-PDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ-- |
7 | 6m9tA2 | 0.17 | 0.16 | 5.23 | 2.96 | FFAS-3D | | DCGS--------VSVAFPITMLLTGFVGNALAMLLVSRSYRRRESFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEH---IDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQQWPGTWCFIST--NWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGR-ITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQ-KECNFFLIAVRLASLNQILDPWVYLLLRKILGRPLEVL------ |
8 | 2ziyA | 0.18 | 0.18 | 5.72 | 0.92 | EigenThreader | | DQVPDAVY---YSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGLMTISCFLKK--------WIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGEGVLCNCSFDYISRDSTTRSNILCMFILGFGPILIIFFCYFNIVMSVSNAKRLNAKAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLT |
9 | 2z73A | 0.18 | 0.17 | 5.53 | 1.73 | CNFpred | | ---------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWI------FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLLCNCSFDYRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVLRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLT |
10 | 2ziyA | 0.19 | 0.18 | 5.90 | 1.50 | DEthreader | | EFDQ-VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLKK----WI-F--GFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIRPMAAS-KKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLELNCSFDISRDSTTRSNILCMFILFFGPILIIFFCYFNIVMSVSNEKEMQANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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