Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCSSSCCCCCCCCSCCCHHHCCCCHHHCSSSCCCCCCCSSCCCCCCCCCCCSSSCCCCCCCCCCCHHHHHCHHHCCSSSCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCSCCCHHHCCCCCSSSCCCCCCCCCCCCCCC GLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNTWTLKKLPLSLSFLHLTRADLSYPSHDMVCTPKSD |
1 | 4p8sA2 | 0.18 | 0.17 | 5.48 | 1.33 | DEthreader | | HLRSLETFQG-L-E-RLQSLHLYRCQ-LSSLPGNIFRG-LVSLQYLYLQENSLLHLQDDLFADLNLSHLFLHGN-RLRLLTEHVFR-GLGSLDRLLLHGNRLQGVHRAAFLSLTILYLFNN-SLASLPGEAALPALEFLRLNANPWACALWAWRA |
2 | 4kt1A3 | 0.23 | 0.23 | 7.06 | 2.01 | SPARKS-K | | QLKTVP-SEAIRGLSALQSLRLDAN-HITSVPEDSFEGL-VQLRHLWLDDNSLTEVPVHLSNLPTLQALTLALNK-ISSIPDFAFTNL-SSLVVLHLHNNKIRSLSQHCLDNLETLDLNYNNL-GEFPQIKALPSLKELGFHSNSISVIPDGAFD |
3 | 4u7lA | 0.24 | 0.22 | 6.83 | 0.42 | MapAlign | | RITQLPVR--AFKLPRLTQLDLNRN-RIRLIEGLTFQGLN-SLEVLKLQRNNISKLTDGAFWGLKMHVLHLEYN-SLVEVNSGSLYGL-TALHQLHLSNNSIARIHRKGCQKLHELVLSFNN-LTRLDSLAELSSLSVLRLSHNSIS-------- |
4 | 5lfnA | 0.18 | 0.17 | 5.67 | 0.30 | CEthreader | | QIREVAAGA-FRGLKQLIYLYLSHN-DIRVLRAGAFDDLT-ELTYLYLDHNKVTELPRGLLSPVNLFILQLNNNK-IRELRAGAFQGA-KDLRWLYLSENALSSLQPDDVENLAKFHVDRNQLSSYPSAALSLRVVEELKLSHNPLKSIPDNAFQ |
5 | 3g04C2 | 1.00 | 0.77 | 21.50 | 1.76 | MUSTER | | --KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNT---------------------------------- |
6 | 2xotA | 0.22 | 0.21 | 6.71 | 0.71 | HHsearch | | NLSRLRAE-WTPRLTNLHSLLLSHN-HLNFISSEAFVPVPN-LRYLDLSSNHLHTLDEFLFSDQALEVLLLYNNH-IVVVDRNAFEDM-AQLQKLYLSQNQISRFPVELLPKLMLLDLSSNK-LKKLPLLQKLPAKNGLYLHNNPLECDCKLYQL |
7 | 3g04C2 | 1.00 | 0.77 | 21.50 | 1.50 | FFAS-3D | | --KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNT---------------------------------- |
8 | 2v70A | 0.15 | 0.15 | 4.97 | 0.65 | EigenThreader | | NQKLNKIPEHIPQ--YTAELRLNNNE-FTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEASGVNEILLT-SNRLENVQHKMFKGLE-SLKTLMLRSNRITCVGNDGLSSVRLLSLYDNQITTVAPGAFDTLHSLSLNLLANPFNCNDFTCDD |
9 | 4mqwX | 0.43 | 0.41 | 12.12 | 5.41 | CNFpred | | GIKHLPDVHKIHSL-QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGA-SGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFAN--- |
10 | 4rcaB | 0.22 | 0.21 | 6.70 | 1.33 | DEthreader | | SLTRLFEFANFY--N-AVSLHMENNG-LHEIVPGAFLGLQ-LVKRLHINNNKIKSFRKQTFLLDDLEYLQADFNL-LRDIDPGAFQDL-NKLEVLILNDNLISTLPANVFVPITHLDLRGN-RLKTLPYELEIPGIAEILLEDNPWDCLLKEWNI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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