>P16473 (136 residues) MRPADLLQLVLLLDLPRDLGGMGCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLI ETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD ALKELPLLKFLGIFNT |
Sequence |
20 40 60 80 100 120 | | | | | | MRPADLLQLVLLLDLPRDLGGMGCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT |
Prediction | CCHHHHHHHHHHHHHHHHCCCCCCCCCCCSCCCCCSSSSSCCCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCCSSSCCCCCCCCSCCCHHHCCCCCCCSSSCCCCCCCCSCCHHHHCCCCCCCSSSCCCC |
Confidence | 9839999999999998762788888887661699227983699876999999864899648979710925236877887997789997225180032388887787835899965438146368999988962069 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MRPADLLQLVLLLDLPRDLGGMGCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT |
Prediction | 7432313211211111332424301244243476431304355144327236514403045240551365106504403402045143054045400650440340404534304303540256146543440358 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHHHHCCCCCCCCCCCSCCCCCSSSSSCCCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCCSSSCCCCCCCCSCCCHHHCCCCCCCSSSCCCCCCCCSCCHHHHCCCCCCCSSSCCCC MRPADLLQLVLLLDLPRDLGGMGCSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT | |||||||||||||||||||
1 | 3wo9A1 | 0.20 | 0.17 | 5.43 | 1.33 | DEthreader | ---H---MA--C-LAVG--K---DD---ICTCSNKETVDCSKKLTAVPTIPANTEKLQLDFNQLANIPAEAFHGLTRLTYLALDYN-QLQSLPVGVFDQLNNLNELRLQDN-QLTSLPPGVFDSLTKLTYLTLSQN | |||||||||||||
2 | 3wo9A1 | 0.21 | 0.18 | 5.83 | 2.18 | SPARKS-K | ----------------HMACLAVGKDDICTCSNKTTVDCSSKKLTAVPTIPANTEKLQLDFNQLANIPAEAFHGLTRLTYLALDYN-QLQSLPVGVFDQLNNLNELRLQDN-QLTSLPPGVFDSLTKLTYLTLSQN | |||||||||||||
3 | 3g04C | 0.96 | 0.76 | 21.24 | 0.42 | MapAlign | ---------------------------ECHQE--EDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT | |||||||||||||
4 | 3g04C | 1.00 | 0.79 | 22.03 | 0.28 | CEthreader | -----------------------------ECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT | |||||||||||||
5 | 3m18A1 | 0.21 | 0.18 | 5.59 | 1.91 | MUSTER | ----------------------TCETTGCTCNGKKEVDCQGKSLDSVPGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYN-QLQTLSAGVFDDLTELGTLGLANN-QLASLPLGVFDHLTQLDKLYLGGN | |||||||||||||
6 | 5xnpA | 0.21 | 0.18 | 5.62 | 0.76 | HHsearch | -----------------PGDPQICPK-RCVCQILLATLCAKKGLLFVPPIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRN-TISFITPHAFADLRNLRALHLNSN-RLTKITNDMFSGLSNLHHLILNNN | |||||||||||||
7 | 4qdhA1 | 0.21 | 0.17 | 5.38 | 1.29 | FFAS-3D | ------------------------CPSRCSCSG-TEIRCNSKGLTSVPGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSRNNLAQAVNGSQFLPLTNLQVLDLSHNK-LDLYHWKSFSELPQLQALDLSYN | |||||||||||||
8 | 4psjA2 | 0.16 | 0.14 | 4.67 | 0.57 | EigenThreader | PQG------------LFESLTTLTSNNQITSLASLTQLNLNQITSLPQGLLTNLTQLNLSNNQITSLPQGLFESLTNLTQLNLSNN-QITSLPQGLFESLTSLTQLNLSNN-QITSLPQGLFESLTNLKQLNLSGN | |||||||||||||
9 | 2xwtC | 1.00 | 0.83 | 23.26 | 3.38 | CNFpred | -----------------------CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT | |||||||||||||
10 | 3wo9A | 0.20 | 0.17 | 5.43 | 1.33 | DEthreader | ---H---MA--C-LAVG--K---DD---ICTCSNKETVDCSKKLTAVPTIPANTEKLQLDFNQLANIPAEAFHGLTRLTYLALDYN-QLQSLPVGVFDQLNNLNELRLQDN-QLTSLPPGVFDSLTKLTYLTLSQN | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |