Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSCCSSSCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSCCCCCSSSSSSCCSSSCSSSCCCCCSSSSSSCHHHHCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC PKFAYGKVTLEKLKTVGAALDILCPSGDTEDAVRSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKDSWLDHV |
1 | 3thcA | 0.67 | 0.52 | 14.69 | 1.00 | DEthreader | | GAAQP-V-LCGPIKSFIQVKQVLYSSPLGVFKG-PLDTEAVSHLG-G----------NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFV-DRPVI-GSS---------------------------- |
2 | 3thcA | 0.66 | 0.55 | 15.61 | 2.53 | SPARKS-K | | LVENMGRVNYGYINDFKGLVSNL--TLSSNILTDWTIFPLDTEDAVRSHLGGWGHRNYT-LPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
3 | 3thcA | 0.65 | 0.53 | 15.17 | 0.68 | MapAlign | | ----NPAPLSSPLNGVHDRAYVAVATLDLLVENMGDWTIFPLDTEDAVRSHLGGWGHRNYTPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGS------------------------------- |
4 | 3thcA | 0.68 | 0.56 | 16.03 | 0.64 | CEthreader | | LVENMGRVNYGAINDFKGLVSNLTL--SSNILTDWTIFPLDTED-AVRSHLGGWGHRNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
5 | 3thcA | 0.68 | 0.56 | 16.03 | 1.45 | MUSTER | | KAGNMGRVNYGAINDFKGLVSNL--TLSSNILTDWTIFPLDTEDAVRSHLGG-WGHRNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
6 | 3thcA | 0.68 | 0.56 | 16.03 | 3.39 | HHsearch | | LVENMGRVNYGAINDFKGLVSNL--TLSSNILTDWTIFPLDTEDAVRSHLGGW-GHRNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
7 | 3thcA3 | 0.95 | 0.52 | 14.62 | 1.47 | FFAS-3D | | --------------------------------------------------------TLEKLKAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
8 | 3thcA | 0.71 | 0.56 | 15.99 | 1.00 | EigenThreader | | NYGAYINDFKGLVSN----LTLSSNILTDWTIF---PLDTEDAVRSHL---GGWGHRNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
9 | 3wf3A | 0.71 | 0.57 | 16.15 | 2.69 | CNFpred | | LVENMGRVNYGAYNDFKGLVSNLTLS--SNILTDWTIFPLDTEDA---VRSHLG---NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIGSS------------------------------ |
10 | 4e8cA | 0.22 | 0.16 | 4.99 | 1.00 | DEthreader | | GCPQ--LLSSPVES--EELGQLLYRIIDGDRKG-YPLPLNPEKIDFSK-GW----T--QGQPAFYAYDFTVE--E---PKDTYLDLSEFGKGVAFVNGQNLGRFWNVGP-TLSLYIPHSYLK-EGANRIIIFETEGQ-Y------KEEIHLT-RKPTL--KHI-----KGENL----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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