>P16233 (112 residues) RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQ MVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC |
Sequence |
20 40 60 80 100 | | | | | RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC |
Prediction | CCSSSSSSSSSCCCSSSSSSSSSSCCCCCCSSSSSSSCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCCCCCCSSSSSSSSCCCSSSSSCCCCCCCCCSSSCCCCC |
Confidence | 9328999999557123289999975999702478875100899737888753666576479999981773466677301289999918971998337884165603112699 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC |
Prediction | 7343403030427504030201021574335414234340434441343032535345164040204542142345402153030426664424012543045502441468 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCSSSSSSSSSCCCSSSSSSSSSSCCCCCCSSSSSSSCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCCCCCCSSSSSSSSCCCSSSSSCCCCCCCCCSSSCCCCC RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC | |||||||||||||||||||
1 | 3o8yA | 0.21 | 0.20 | 6.25 | 1.33 | DEthreader | --SYTVTVATGSHGTDDYIYLSLVGSAGCSEKHLLDKGSFERGAVDSYDVTVDEELGEIQLVRIEKRKYGS-N--DDWYLKYITLKTPHGDYIEFPCY-RWITGVEVVLRDR | |||||||||||||
2 | 1ethA2 | 0.85 | 0.84 | 23.64 | 2.50 | SPARKS-K | -WRYKVSVTLSGKKVTGHILVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYN-VINPTLPRVGASKITVERNDGKVYDFCSQETVREEVLLTLNPC | |||||||||||||
3 | 1ethA | 0.85 | 0.84 | 23.65 | 1.13 | MapAlign | RWRYKVSVTLSGKKVTGHILVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYNV-INPTLPRVGASKITVERNDGKVYDFCSQETVREEVLLTLNPC | |||||||||||||
4 | 1ethA | 0.85 | 0.84 | 23.65 | 0.85 | CEthreader | RWRYKVSVTLSGKKVTGHILVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYNV-INPTLPRVGASKITVERNDGKVYDFCSQETVREEVLLTLNPC | |||||||||||||
5 | 1ethA2 | 0.85 | 0.84 | 23.64 | 2.28 | MUSTER | -WRYKVSVTLSGKKVTGHILVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYN-VINPTLPRVGASKITVERNDGKVYDFCSQETVREEVLLTLNPC | |||||||||||||
6 | 2pplA2 | 0.65 | 0.64 | 18.35 | 2.80 | HHsearch | -WRYGVSITLSGRTATGQIKVALFGNKGNTHQYSIFRGILKPGSTHSYEFDAKLDVGTIDKVKFLWNNNVINPTLPKVGATKITVQKGEKTVYNFCSEDTVREDTLLTLTPC | |||||||||||||
7 | 1ethA2 | 0.84 | 0.82 | 23.16 | 1.98 | FFAS-3D | -WRYKVSVTLSGKKVTGHILVSLFGNEGNSRQYEIYKGTLQPDNTHSDEFDSDVEVGDLQKVKFIWYNVI-NPTLPRVGASKITVERNDGKVYDFCSQETVREEVLLTLNPC | |||||||||||||
8 | 6e7kA2 | 0.24 | 0.23 | 7.24 | 0.93 | EigenThreader | VFHYQVKIHFSGETHTQAFEISLYGTVAESENIPFTLPEVSTNKTYSFLIYTEVDIGELLMLKLKWKSD---SSSPGFAIQKIRVKAGETQKVIFCSEKVSHGKAPAVFVKC | |||||||||||||
9 | 1gplA | 1.00 | 1.00 | 28.00 | 2.06 | CNFpred | RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTPC | |||||||||||||
10 | 4nreA | 0.16 | 0.15 | 5.05 | 1.33 | DEthreader | -AEFRVRVSTGEGGTWDKVSVSIVGTRGESPPLPLDNGKETAGAEEDFQVTLPEDVGRVLLLRVHKAPPL-AP--DAWFCRWFQLTPPRGGHLLFPCY-QWLEGGTLVLQET | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |