Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC MDPLNLSWYDDDLERQNWSRPFNGSDGKADRPHYNYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWKFSRIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISCPLLFGLNNADQNECIIANPAFVVYSSIVSFYVPFIVTLLVYIKIYIVLRRRRKRVNTKRSSRAFRAHLRAPLKGNCTHPEDMKLCTVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTSLKTMSRRKLSQQKEKKATQMLAIVLGVFIICWLPFFITHILNIHCDCNIPPVLYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFLKILHC |
1 | 5ztyA | 0.19 | 0.15 | 4.83 | 1.17 | DEthreader | | ---------------------KDYMIL--SGPQKTAVAVLCTLLGLLSALENVAVLYLILSSHQLRKPSYLFIGSLALADFLASVVFACSFVNFHVFH-GVDSKAVFLLKIGSVTMTFTASVGSLLLAAIDRYLCLRYPPSYKALL-TRGRALVLLGIMWVLSALVSYLPLMGWTCCC--LFPLIPNDYLLSWLLFI-AFLFSGIIYTYGHVLWKAHQHVASNIFEMLREGLGIGHLL--TKSPSLNAAKSELDKAIG---R---N-----------------------------------------------TNGVITKEAEKLFNQDVDAAVRIINMVFQMGG-R---QTPNRAKRVDAYARMRLDVELAKTLGLVLAVLLICWFPVLALMAHSLATTLSQVKKAFAFCSMLCLINSMVNPVIYALRSEEIRSSAHHCLWK |
2 | 6wgtA | 0.30 | 0.25 | 7.60 | 2.47 | SPARKS-K | | -------------------------------QEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPISR---FNSRTKAFLKIIAVWTISVGISMPIPVFGKVFKEGSCLLADDNFVLIGSFVSFFIPATIMVITYFLTIKSLQKEAADLEDNWETLNDNLKVIEKAD-----------------------NAAQVKDALTKMRAAALDAQKATPPKE-------DKSPDSPEMKDFRHGFDILVGQIDDAKLAKEA-----------QAAAEQLKTTRNAYIQKYLTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKESCIGALLNVFVWIGYASSAVNPLVYTLFNKTYRSAFSRYIQC |
3 | 2ziyA | 0.18 | 0.13 | 4.18 | 0.66 | MapAlign | | ------DNETWWYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAAS-KKMSHRRAFIMIIFVWLWSVLWAIGPIGAYTLEGVLCCSFDTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMA---------------------------------------------------------------------------------------------------------------------------KRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF-- |
4 | 2ziyA | 0.19 | 0.13 | 4.31 | 0.33 | CEthreader | | ---DLRDNETWWYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKM-SHRRAFIMIIFVWLWSVLWAIGPIFYTLEGVLCNCSFDTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAK---------------------------------------------------------------------------------------------------------------------------RLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW |
5 | 6li0A | 0.16 | 0.16 | 5.23 | 2.05 | MUSTER | | --------------VSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMWCLACISVDRYLAITKPLSYNQLV-TPCRLRICIILIWIYSCLIFLPSFFGWGKPGYHGDIFTSAYFTGFIVCLLYAPAAFVVCFTYFHIFKICRQHTKEAKALIVYGSTTGNTEYTAETIARELADAGYVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIRRYLMVLFRITSVFYMLQLPYIIYFLLESSRVL-DNPTLSFLTTWLAISNSFCNPVIYALSDSTFRLGLRRLSET |
6 | 6kp6A | 0.24 | 0.22 | 6.84 | 1.47 | HHsearch | | ------------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRT-TKMAALMIAAAWVLSFVLWAPAILFWQFVPDNQCFAQNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFIGRFDRGQKGVDVLILSSKKFQEMRFIIGKGDPEEKHGNVITEMLSREFVRELYGSVDFVPSIASADIITNETGILAGDPGELANALKALELSRSDLKFRENCSFSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLC |
7 | 7ddzA | 0.19 | 0.17 | 5.40 | 3.28 | FFAS-3D | | --------------------------------VQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRYRCIVYHLESKISKRISFLIIGLA---WGISALLASPLAIFREKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKETIARELADAGYEVDSRDAASVEAGGLFEG----FDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGR-----------KVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIDHYHQRRQKTTKMLVCVVVVFAVCWLPLHAFQLAVDIDSQVLDLLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRC |
8 | 3pblA | 0.47 | 0.42 | 12.30 | 0.92 | EigenThreader | | ------------------------------YAL------SYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQFEMLRIDEGLRLKIYKDTEGYIGSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAK-----SRWYNQTPNRAKRVITTFRTGEKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC |
9 | 7dfpA | 0.78 | 0.59 | 16.60 | 2.05 | CNFpred | | ----------------------------------NYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWKFSRIHCDIFVTLDVMMCTAKIWNLCAISIDRYTAVAMPM-------SKRRVTVMISIVWVLSFTISCPLLFGLNNADQNECIIANPAFVVYSSIVSFYVPFIVTLLVYIKIYIVL-DNWETLNDNLKVI----------EKADNAAQVKDALTKMRAAALDAGS-DILVGQIDDALKLANEG-------------------------------------------------KVKEAQAAAEQL-------KTTINAYIQKYGSQQKEKKATQMLAIVLGVFIICWLPFFITHILNIHCDCNIPPVLYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFLKILH- |
10 | 4rnbA | 0.23 | 0.18 | 5.73 | 1.17 | DEthreader | | --------------------------P--K-EYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHP------ST-AKRARNSIVIIWIVSCIIMIPQAIVMECSTVTVCDERWPMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQG--ID-CSFWNESYLT-GSRDE--R--KKSLLSKFMTFMFIG-FD--------------------------------------------KAIEILSFMRFIIIGITEMLSREFVRELYGSECLG---SKFRENCKKRAMSFSKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRFGMFATVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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