Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCSSSSCCCCSSSSCCCCSSCCCCSSCCSCCCCCCCCCCSSSSSCCCCCSSCCCSSSSSSCCCSSSSCCCCSSSCCCCCSCCCCCSSCCSCCCCCCCCCCCSSSSSCCCCCCCCCCSSSSSCCCCCSSSCCCSSSSCCCCSSCCCCCSSSSCCCCCCCCCCCCSCCCSSCCCSSSSSCCCCSSSSSSCCSSSSCCCCSSCCCCCC QPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVIQCEPLEAPELGTMDCTHPLGNFSFSSQCAFSCSEGTNLTGIEETTCGPFGNWSSPEPTCQVIQCEPLSAPDLGIMNCSHPLASFSFTSACTFICSEGTELIGKKKTICESSGIWSNPSPICQKLDKSFSMIKEGDYNPLFIPVAVMVTAFSGLAFIIWLARRLKKGKKSKRSMNDPY |
1 | 1c1zA | 0.21 | 0.18 | 5.84 | 1.17 | DEthreader | | KTVVYSGMRKFICPTGLWPINTLK-C------TPRVCPFAGILENGAVRY-T---TFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT-KLPECREVKCPFPSRPDN-V--LYYKKATFGCGYS-LD-GP--IE-CT-KLGNW--M---- |
2 | 4c16A | 0.44 | 0.33 | 9.66 | 2.27 | SPARKS-K | | YTAACTGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKA------------------------------------------------------ |
3 | 1c1zA | 0.22 | 0.21 | 6.53 | 0.95 | MapAlign | | --GILE-NGAVRYYPNTISFSCNTGFYLPVC-APIICPPPSIPTFATLRVYSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNY-PAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKASERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQCIDGTIEV-------- |
4 | 4c16A | 0.46 | 0.34 | 9.92 | 0.66 | CEthreader | | TNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKA------------------------------------------------------ |
5 | 4c16A | 0.46 | 0.34 | 9.92 | 1.62 | MUSTER | | TNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKA------------------------------------------------------ |
6 | 4c16A | 0.46 | 0.34 | 9.92 | 1.40 | HHsearch | | TNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKA------------------------------------------------------ |
7 | 1c1zA | 0.18 | 0.17 | 5.68 | 1.32 | FFAS-3D | | -TYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRCPFAGILENGAVR----YTTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMP-- |
8 | 1c1zA | 0.17 | 0.16 | 5.14 | 1.18 | EigenThreader | | CPFAGILENGAVRYTNTISFSCNTGFYLNGVCAPICPPPSIPTFATLRVYKPSAGNNYRD-TAVFECLPQHAMFGNDTIT-CTTHGNWTKLPECREVKCPFPSRP-DNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASCKLKNGMLHGDAQCIDGTIEVPKCFKEHSSLA----------FWKTDASDVKPC |
9 | 4c16A | 0.46 | 0.34 | 9.92 | 3.88 | CNFpred | | TNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLGNFSYNSSCSISCDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMGAQSLQCTSSGNWDNEKPTCKA------------------------------------------------------ |
10 | 3o8eB | 0.19 | 0.17 | 5.33 | 1.00 | DEthreader | | ELIG---------GERVDYK-FYIP-LATHACYRETCPYIRDPLNGQAVPANGT--YEFGYQMHFICNEGYYLIGEEILYCELVAIWSGKPPICEKVLCTPPPKIKNGKHTF-SEVEVFEYLDAVTYSCDPAFSLIGESTIYCGDNSVWSRAAPECKVVKCRFP---NGKQ--KKFYYATVMFECDKF-L--SDTIV-CDSNSTWPV----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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