Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSCCCCC MERRRITSAARRSYVSSGEMMVGGLAPGRRLGPGTRLSLARMPPPLPTRVDFSLAGALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLATVRQKLQDETNLRLEAENNLAAYRQEADEATLARLDLERKIESLEEEIRFLRKIHEEEVRELQEQLARQQVHVELDVAKPDLTAALKEIRTQYEAMASSNMHEAEEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRETSLD |
1 | 7kogB | 0.13 | 0.11 | 3.86 | 1.97 | FFAS-3D | | -----------------------------------------------------------EELEEAKRKLQARLAEAEETIESLNQKVIALEKTKQRLATEVEDLQLEAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQTALEEARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELGDAHEQINELAAQATSASAAKRKLEGELQTLH |
2 | 5lm1A | 0.10 | 0.08 | 2.91 | 1.32 | SPARKS-K | | --------------------------------------------------AHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMDNLDAYSPQLMEKCAAL--SVRPDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKFQEAVITSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSDQVRAALEDKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITAMKKLFEEQLKKYDQLKVYLEQNLAAQDRVLCALTEANVQYAAVRRVLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQLLDRE-------------------------------- |
3 | 2tmaA | 0.16 | 0.11 | 3.79 | 1.19 | CNFpred | | ----------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKY----------EEVARKLVIIESDLERAEERAELSEGKC-------------------AELEEEIKTVTNNLKSLEAQAE-----------KYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI--------------- |
4 | 6yvuA | 0.08 | 0.08 | 3.26 | 1.08 | MapAlign | | SLICEDPETAKKITFHPKIRARSITLQGDVYDPEGTLSGGSRESLLVDIQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKELNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKTYRERSKQLNEKFQEPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKRETLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVTQGLEVKV |
5 | 6yvuA | 0.08 | 0.08 | 3.15 | 1.33 | HHsearch | | IYTRPISPGKAMEFIFGNSLICEDPETAKKFHPRARSPEGTLSGGSRE--S--LLV-DIQKYNQIQK----QIETIQADLNHVTEELQTQYATLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSENKTLLHNHLKSIESLKLENSDLEGKRGVEDDLVTVQTELNEE-----KKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTDTYRERSKQLNEKFQELRKNVEKKEAALKTMIKTIEKDKMKIQETISKLNEYRETLVKTWEKVTLDFGNIFADLPNSFAKLVPCEDVTQGLEVKVKLGN |
6 | 2tmaA | 0.11 | 0.08 | 2.76 | 1.94 | FFAS-3D | | ------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAA------------EDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV---------------------IESRAQKDEEKMEIQEIQLKE-AKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI-------- |
7 | 1sjjA | 0.11 | 0.11 | 3.87 | 1.28 | SPARKS-K | | QQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEEWLLNEIERLDHLAEKFRQKASIHESWTDGKEAMLQQ--KDYETATLSEIKALLKKHEAFESDLQDRVEQIAAIAQELNEDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQEEIQGLTTAHEQFKTLPDADKERQAILGIHNEVSKIVQTYTPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRILEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEAMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFN |
8 | 1hciA | 0.12 | 0.09 | 3.31 | 1.04 | CNFpred | | -----------------------------------------------------------KGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVH----SIEEIQSLITAHEQFKATLADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVP---IRDQSLQEELARQHA-NERLRRQFAAQANAIGPWIQNKMEEIARSSIALEDQMNQLKQYEHNIINYKNNIDKLEG-------------------- |
9 | 6yvuB | 0.12 | 0.11 | 4.06 | 1.32 | HHsearch | | LRQFNLTPENAFYSVLRDTLVAQNLKQANNVAYRFRVISGTMSGGGNHVAK-GLMKLTPEEVDKIER----ELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQIAEMEADSLASELTLAEQQVKEAEMAYVKAVAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKINSKVESVCQKLDILVAKLKKVKSASGGDVVKFQKLLQNSERDVELSSDEKVIEEQLKHTKLALAENDTNMTLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEVELIESKINELSYYVEEEYKRRKLDLNNAVQKRDEVKEQLGILKKRFDEFMAGFNIISMTLKEMYQMITGGNAELELVDPFSEGVTFSVMPPK |
10 | 7ko4P | 0.17 | 0.11 | 3.76 | 1.83 | FFAS-3D | | ---------------------------------------------------------------------KLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKK-----LKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEA-----------------KHIAEDADRKYEEVARKL-----VIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLK----EAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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