>P13995 (173 residues) MAATSLMSALAARLLQPAHSCSLRLRPFHLAAVRNEAVVIATPWGVWEIIKRTGIPTLGK NVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAA GIPNLITADMIKEGAAVIDVGINRVHDPVTAKPKLVGDVDFEGVRQKAGYITP |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAATSLMSALAARLLQPAHSCSLRLRPFHLAAVRNEAVVIATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHDPVTAKPKLVGDVDFEGVRQKAGYITP |
Prediction | CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCHHHHHHHHHCCCCCCCCCCCSSSSSCCCCCHHHHHHHHHHCCSSSSSSCCCCCCCHHHCCCCCSSSSCCCCCCCCCCCCCCSSSCCCCHHHHHHHCCCCCC |
Confidence | 99665779999982495345578999666544238998587589999999996999899669997897546589999999705455677886699973889634799998647889995154351258777899289981365578887889727614786898855242599 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAATSLMSALAARLLQPAHSCSLRLRPFHLAAVRNEAVVIATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHDPVTAKPKLVGDVDFEGVRQKAGYITP |
Prediction | 85655134520252023621014222130102035712110004000300542715144230000131431020003002343355444340100000341457403510450300000113341044620352000000110324356575110000011650373042127 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCHHHHHHHHHCCCCCCCCCCCSSSSSCCCCCHHHHHHHHHHCCSSSSSSCCCCCCCHHHCCCCCSSSSCCCCCCCCCCCCCCSSSCCCCHHHHHHHCCCCCC MAATSLMSALAARLLQPAHSCSLRLRPFHLAAVRNEAVVIATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHDPVTAKPKLVGDVDFEGVRQKAGYITP | |||||||||||||||||||
1 | 5tc4A | 0.84 | 0.74 | 20.86 | 1.17 | DEthreader | ------------NPASHSYVMLVQDDGFHVINVRYSM-LPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHE---GDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRV-H----KPKLVGDVDFEGVRQKAGYITP | |||||||||||||
2 | 5tc4A | 0.80 | 0.78 | 22.04 | 1.83 | SPARKS-K | LVQLPLPEHIDERRICNAVSPDKDVDGFHVINVGQYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVH-----KPKLVGDVDFEGVRQKAGYITP | |||||||||||||
3 | 5tc4A | 0.80 | 0.76 | 21.55 | 0.66 | MapAlign | ---LPLPEHIDERRICNAVSPDKDVDGFVGRMCLDQYSLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRV-----HKPKLVGDVDFEGVRQKAGYITP | |||||||||||||
4 | 5tc4A | 0.80 | 0.77 | 21.88 | 0.66 | CEthreader | LVQLPLPEHIDERRICNAVSPDKDVDGFHVINVDQYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHK-----PKLVGDVDFEGVRQKAGYITP | |||||||||||||
5 | 5tc4A | 0.80 | 0.77 | 21.88 | 1.80 | MUSTER | LVQLPLPEHIDERRICNAVSPDKDVDGFHVINVDQYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHK-----PKLVGDVDFEGVRQKAGYITP | |||||||||||||
6 | 4a26A | 0.37 | 0.35 | 10.47 | 1.47 | HHsearch | IVQLPLPKHLNENRAIEKIHPHKDADALLPVNYKGPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE--------NATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPSRKGYRLVGDVCFEEAAARAAWISP | |||||||||||||
7 | 5tc4A2 | 0.79 | 0.73 | 20.75 | 1.90 | FFAS-3D | -------RQEVEEWVASGNDVD-GFHVINVGRMDQYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVHK-----PKLVGDVDFEGVRQKAGYITP | |||||||||||||
8 | 5zf1A | 0.49 | 0.47 | 13.59 | 0.70 | EigenThreader | SDITEEQLLSEIQNLNEDNSVDAIAPEKDRLCVDLPTIVPATALAVVEMLKRFNIDTFGRNAVVIGRSKNVGMPIAMMLHSDKRHESGLGDATVTICHRYTPKDKLEAYCRNADIIITATGLPKLIKADMVKPGATIIDVGITTR---------LVGDVDYEEVSKIAGAITP | |||||||||||||
9 | 5tc4A | 0.80 | 0.78 | 22.04 | 2.06 | CNFpred | LVQLPLPEHIDERRICNAVSPDKDVDGFHVINVGRYSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERPGGDATVTISHRYTPKEQLKKHTILADIVISAAGIPNLITADMIKEGAAVIDVGINRVH-----KPKLVGDVDFEGVRQKAGYITP | |||||||||||||
10 | 4cjxA | 0.40 | 0.35 | 10.41 | 1.17 | DEthreader | ----------KDQTYVRLKRVIVVDADCLPVNVQNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLANE-D-------ATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADP-KPGYRLVGDVCFDVARKRAAYITP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |