Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCSCCCCCSSSSSSCCCCCHHHHHHHHHHCCCCSSSCCCCHHHHHHHHHHHHCCCCCCSSSSSSSCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSCCCCCCCSCSSSCC MKLPLLLALLFGAVSALHLRSETSTFETPLGAKTLPEDEETPEQEMEETPCRELEEEEEWGSGSEDASKKDGAVESISVPDMVDKNLTCPEEEDTVKVVGIPGCQTCRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGHWRRAHCLRRLPFICSY |
1 | 7jptA | 0.20 | 0.15 | 4.90 | 1.00 | DEthreader | | --------GCED-WEKNEGSCYLSINLLNWDRSAPIGG--SIVRKRNWAEWLWIAAVKVFHRHFY----------------------------ETVKY-----LN-NLYKIIPKTLTWHSAKRECLKS-NMQLVSITDPYQQAFLSVQALLHN-SSLWIGLFSQD--DELNFGWSDGKRLHFSRWAETNGQL--EDCVVLDT-DGFWKTVDCNDNQGAICYY |
2 | 1sl6A | 0.19 | 0.14 | 4.36 | 2.38 | SPARKS-K | | ------------------------------------------------PEKSKLQEIYQELTQLKQQQIYQELTDLKTAFER--LCRHCPKD-------WTFFQGNCYFMS-NSQRNWHDSVTACQE-VRAQLVVIKTAEEQNFLQLQTSRSNRF-SWMGLSDLNQE--GTWQWVDGSPLSPSYWNSGEPNNGNEDCAEFSGS--GWNDNRCDVDNYWICKK |
3 | 7jptA | 0.15 | 0.15 | 4.98 | 0.79 | MapAlign | | ITSFVGLKAIKNKIANIKYSPDSAAKVQCSEQWIPFQNKCFLKIKPVSLTFSQASDTCHSYGGTLGLRWTAYEKINKWTDNRELTYSNFHPLLVILNLQKSPFTGTWNYKIIPKTLTWHSAKRECLK-SNMQLVSITDPYQQAFLSVQALLH-NSSLWIGLFSQ--DDELNFGWSDGKRLHFSRWAETNGQL--EDCVVLDT-DGFWKTVDCNDNQGAICYY |
4 | 1h8uB | 0.99 | 0.52 | 14.51 | 0.48 | CEthreader | | ----------------------------------------------------------------------------------------------------------CRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY |
5 | 1h8uB | 0.99 | 0.52 | 14.51 | 1.54 | MUSTER | | ----------------------------------------------------------------------------------------------------------CRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY |
6 | 5xtsA | 0.17 | 0.17 | 5.47 | 1.37 | HHsearch | | SQIMSVAFLCLGVPLGEDLFNYGENIKGSGLRWKIYGTTDNLSRGYEAATCAFPFKFNKWYADCTSDGWLWCGTTTDYDTDKLFGYCPLKFE--GSESLWNKLTSVS-YQISKSALTWHQARKSCQQ-QNAELLSITEIHEQTYLTGLTSSL-TSGLWIGLNSLS--FNSGWQWSDRSPFRYLNWLPGSPSAPGKSCVSLNPKNAKWENLECVQKLGYICKK |
7 | 1h8uB | 0.99 | 0.52 | 14.51 | 1.68 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------CRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY |
8 | 7jptA6 | 0.10 | 0.10 | 3.63 | 1.20 | EigenThreader | | LTITSRFEQEYLNDLMKKYDKSLRKYAVTFSNWNFLEPASPGGCVAMST----------GKSVGKWEVKDCRSFKALMSGPLGPEEASPKPDDPCPEGWQSFPASLSCYKVFHAERNWEEAERFCQALG-AHLSSFSHVDEIKEFLHFLTDQFQHWLWIGLNKRSPDLQGSWQWSDRTPVSTIIMPNEFQQDYDIDCAAVKVFHRHYDDREFIYLRPFACDT |
9 | 1h8uA | 0.99 | 0.51 | 14.38 | 2.38 | CNFpred | | -----------------------------------------------------------------------------------------------------------RYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY |
10 | 5ao5A | 0.22 | 0.13 | 4.11 | 0.83 | DEthreader | | ----------------------------------------------------------------------------H------K-SNDCE-TF-WDKD---QLT-DSCYQFNQSTLSWREAWASCEQQ-GADLLSITEIHEQTYINGLLTG-YSSTLWIGLNDLDT--SGGWQWSDNSPLKYLNWESDQPDNPEENCGVIRTESGGWQNRDCSIALPYVCKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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