>P13671 (169 residues) LTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLN NQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLP PQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | LTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA |
Prediction | CCCCCCCCCCCCSCCCCSSSSSCCCCCCCCCCCCSSSSSCCCCCSSSCHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSCCCCCCSSSSCCHHHCCCCCCSSSSSSSCCCCCSSSHCHHHHHHHHHCCCSSSSSSCCCCCC |
Confidence | 9987888898713259867981751218899743476607788245323678889862288736774115888986332321013137753245667887657801112788807616812399999226999976888446602888889885397079962256779 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | LTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA |
Prediction | 8564666154364476340102024643563424000223647431313203321440345541411341506536425233531514355444531446303413505645440314325504776340200313565453323202000240474515123545168 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCSCCCCSSSSSCCCCCCCCCCCCSSSSSCCCCCSSSCHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSCCCCCCSSSSCCHHHCCCCCCSSSSSSSCCCCCSSSHCHHHHHHHHHCCCSSSSSSCCCCCC LTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||||||||
1 | 1vcoA2 | 0.04 | 0.04 | 1.76 | 0.83 | DEthreader | ---DAGTMRHGEVFVGAETDLDDAYLSLEALR---VDAESLADLAFILVP--GG--F--GVRGIGKVAQYARKIPYLGAVIERKGANSTEFDPH---------T-PH---------PVI--DLMGTMRLDWPMRIKTLHYVLERHHRYEVNPYVLEVVATTPGMR-HFK | |||||||||||||
2 | 3t5oA | 0.98 | 0.98 | 27.36 | 4.28 | SPARKS-K | CEKDTGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||
3 | 3t5oA | 1.00 | 0.96 | 27.01 | 1.26 | MapAlign | -----GHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCL- | |||||||||||||
4 | 3t5oA2 | 0.98 | 0.98 | 27.36 | 1.39 | CEthreader | CEKDTGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||
5 | 3t5oA | 0.98 | 0.98 | 27.36 | 2.35 | MUSTER | CEKDTGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||
6 | 3t5oA | 0.97 | 0.97 | 27.20 | 6.64 | HHsearch | PPISTGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||
7 | 2wcyA | 0.29 | 0.25 | 7.57 | 1.62 | FFAS-3D | LTQAVPKCQRWEKLQNSRCVCKMPYE--CGPSLDVCAQDERSKRILPLTVCKMHVLHCQGRNYTLT------------------GRDSCTLPASAEKACGACPLWGKCDAESSKCVCREASECEEEG-FSICVEV--NGKEQTMSECEAGALRCRGQSISVTSIRPCA- | |||||||||||||
8 | 2wcyA | 0.22 | 0.18 | 5.80 | 0.82 | EigenThreader | TQAVPKCQ--RWEKLQSRCVCKMPY--ECGPSLDVCAQDERSKRILPLTVCKMHVLHCQGRNYTLTGRDSCTLPASA------------------EKACGACPLWGKCDAESSKCVCREAS-ECEEEGFSICVEVN--GKEQTMSECEAGALRCRGQSIVTSIRPCAAE | |||||||||||||
9 | 3t5oA | 1.00 | 0.97 | 27.17 | 6.28 | CNFpred | -----GHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKCLA | |||||||||||||
10 | 4zdiA | 0.06 | 0.05 | 2.07 | 0.83 | DEthreader | ----VDPGMPGEVFVGAETDLDDAYLSVALG-----SGCETTSGAALVLIP-GG--FG-IRGIGKIGIAYARAGLPVCIVIERTNANSEFDPD----------T-PD---------PVI-ATMGTMRLGYPAVLEPSVAAYVERHHRYEVNNYRIARFSGTSPDA-PLK | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |