Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCCSSCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MATNKERLFAAGALGPGSGYPGAGFPFAFPGALRGSPPFEMLSPSFRGLGQPDLPKEMASLSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEMFEDDSSQPGPHPNASSEDEVPGGQGKGGLKSPA |
1 | 4nqaB | 0.30 | 0.17 | 5.22 | 0.83 | DEthreader | | ------------------------------------------------------------------------GPAP-------------LCRVC-------SGFHYNVLS------------------------------------------A--------------I-KK--RQ--EGVQLTAAQELMIQQLVAAQLQCNKSFSDQPVTPWPLGADPQSDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKK-LPPLLSEIWD------------------------------------- |
2 | 4nqaB | 0.35 | 0.26 | 7.89 | 2.28 | SPARKS-K | | ----------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESVQLTAAQELMIQQLVAAQLQCNKRSFSDQPTPWPLGADPQSDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ-DKKLPPLLSEIWD------------------------------------- |
3 | 3e00D | 0.32 | 0.23 | 6.98 | 1.47 | MapAlign | | -------------------------------------------------------------------------------------MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRC-DLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLPFVIYNSLMMGEDKIKFQSKEVAIRIFQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLM-N-KDGVLISEGGFMTREFLKRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTEDMSLHPLLQEIYKDLY---------------------------------- |
4 | 4nqaB | 0.35 | 0.26 | 7.77 | 0.75 | CEthreader | | ----------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIWD------------------------------------- |
5 | 4nqaB | 0.35 | 0.26 | 7.89 | 2.01 | MUSTER | | ----------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIWD------------------------------------- |
6 | 4nqaB | 0.35 | 0.26 | 7.83 | 3.28 | HHsearch | | ----------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQEGVQLTAAQELMIQQLVAAQLQCNKRSFSQPKVTPWGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDK-KLPPLLSEIWD------------------------------------- |
7 | 4nqaB | 0.34 | 0.25 | 7.59 | 3.20 | FFAS-3D | | ----------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIWD------------------------------------- |
8 | 4nqaB | 0.28 | 0.20 | 6.21 | 1.72 | EigenThreader | | -------------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASYNVLSC---EGCKGFFRRSVVRGGARRYA-CRGGGTCQMDAFMRRKCQQCRLRKCKEAGMRERKQQQQESQSQSQSPVGPQGSSSQLTAAQELMIQQLVAAQLQCNKRSF----SDQPKVTPWPLGADPQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFL-KDFTYSDDFHRALQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDK-KLPPLLSEIWD------------------------------------- |
9 | 5uanB | 0.89 | 0.60 | 16.97 | 2.28 | CNFpred | | ----------------------------------------------------------------------------------------PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVR---------------------TAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE------------------------------------- |
10 | 3e00D | 0.23 | 0.14 | 4.29 | 0.83 | DEthreader | | ---------------------------------------------------------------------------------------------------------------C---F--TILKLIYD---R-CDL-CSNKCQYC--RF--Q------K-LAVG----------SS-IDQLNPESADLRALAKHLYDSYIKSFPLAI--PFVIYDMNSLMMKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLM-N-KDGVLISEGGFMTREFLKSLPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKETDMSLHPLLQEIYKDLY---------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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