Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MCPPQAQAEVGPTMTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR |
1 | 1vt4I3 | 0.08 | 0.08 | 3.22 | 1.34 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 2ql2C | 0.33 | 0.07 | 2.04 | 2.91 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------RRMANNARERVRVRDINEAFRELGRMCQLHLKSD-QTKLLILQQAVQVILGLEQQVRER----------------------------------------------------------------------- |
3 | 5xevA | 0.06 | 0.06 | 2.54 | 0.75 | CEthreader | | VSGQRLAMEYSPNGAVPYVSRVDAGTLERVRGAGAAEVASSADLLQAFLVWTPDDLAAHRRAAALLMRAKDDAFRLIHDRLRAGQSVTEWEVQQLIMDQIRAAGMQAGHDVNVSFGVNAADATLHPGECVLIDLWAQEPGRPFADVTWVGFAGEPGTEYLDAWQAVRAAREAALELLRSRFVAEGYGRLQGWELDRAARDAMGERWAPHFLHRTGHDLGVQIHGAGANLDDYETRDTRTLTPGLSVTVESEVDVYLAPDGPEVTTDLQQAPFILGVGDWD |
4 | 6djsA | 0.06 | 0.06 | 2.54 | 0.60 | EigenThreader | | KTLN--VNCVDYMGQNALQLAVGNEHENLARINHPGFAITPIILAAHCQKYEVVHMLLMKGARSPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGPLEVHRHKASLSRVKLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTNDEVNE |
5 | 2ypaA | 0.80 | 0.19 | 5.35 | 0.66 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------PHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE---------------------------------------------------------------------- |
6 | 5jcss | 0.08 | 0.07 | 2.73 | 0.91 | SPARKS-K | | KAPTDVLSILLSLLEKRELTI--PSRGETVKAANGSTVRINEDHQKDSSNKIYNLNMIG----MRIWNVIELEEPSEEDLTH-----ILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISL--NKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALE---------------PIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLREQISVCIQMT |
7 | 2ypaA | 0.83 | 0.19 | 5.34 | 0.59 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------TKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE---------------------------------------------------------------------- |
8 | 5a22A | 0.05 | 0.03 | 1.57 | 0.67 | DEthreader | | LFLVVGNFSDDTGKLGR---RTCFFALLMYLHSST--------------------LKEMAVNPEIAKF-------INPL--F-------------PAYLGSKTSE------TGSALH-FS-------QNFDFLFQATICLRPIE---S-VGRCIGFLYGDLLRASCCQVIHRRSLAH----------L--KR--PANAVYGGLIYLIDKLSVPLNVRASPEETCWYPSLIVMDLIYKTAIFKTVDLVSI-ESKNLYAFQSSEQEFARAKKST------RL |
9 | 3v4pA | 0.04 | 0.04 | 2.01 | 0.97 | MapAlign | | ---GCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGASSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGEEGRVFVYINSGSGAVMNAMETNLVGSDKAARFGESIVNLGDIDNDGFEDVAIGAPQEDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTR------------ |
10 | 6fmlG | 0.12 | 0.12 | 4.28 | 0.71 | MUSTER | | FERADTSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLYDEPEDKKWTPVHALFQICERENPKAVAEIT-GVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSGKLAKDELLRELK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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