Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCC GLQIPAILGILGGILALLILILLLLLFLRRRAVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTLMSVPRYLPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDYLNEWGNRFKKLADMYGGGEDD |
1 | 3ifqC | 0.88 | 0.43 | 12.11 | 1.08 | FFAS-3D | | --------------------------------------------------------------------------------RNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGGEAASLSL--------NSDQDYDYLNEWGNRFKKLADMYGGG--- |
2 | 3ifqC | 0.93 | 0.46 | 13.02 | 1.26 | MUSTER | | ------------------------------------------------------------------------------VTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGG--EAASLS-------NSDQDYDYLNEWGNRFKKLADMYGGG--- |
3 | 3ifqC | 0.96 | 0.48 | 13.47 | 3.90 | HHsearch | | ------------------------------------------------------------------------------VTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGG--EAASLS-LNS-----DQDYDYLNEWGNRFKKLADMYGGG--- |
4 | 6mjpG | 0.11 | 0.11 | 4.02 | 0.44 | CEthreader | | GRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAFATSGGAIRDANDFIFIAKVENEHLYGLNLWRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTR |
5 | 5yd1A | 0.06 | 0.06 | 2.49 | 0.50 | EigenThreader | | RPAIEHYIAEVDKTSKEIAEERENVVAQTTQTRNPTEWFFIIPIAFVQSLATIKSLIQGLLAGIALKLFLIFLPAILMTMSKFEGF---TSVSFLERRSASRYYIFNLVNAAFEQLKTIGMAIPMKATFFITYIMVDGWYFLLGLVYAPVTPMLLPFILVFFALAYVVYRHQIINVYNQ |
6 | 3j3vE | 0.10 | 0.08 | 2.92 | 0.41 | FFAS-3D | | ------------------VVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTG-----------RARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLLIVTADANEAVALSARNIPGVTVVEANGINVLDVVNAAVEKVEEVLA----- |
7 | 3ifqC | 0.92 | 0.46 | 13.02 | 0.86 | SPARKS-K | | ------------------------------------------------------------------------------VTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGG--EAASLS------LNSDQDYDYLNEWGNRFKKLADMYGGG--- |
8 | 3ifqC | 0.94 | 0.49 | 13.64 | 0.73 | CNFpred | | ------------------------------------------------------------------------------VTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGMGMEAASLMSLNS-----DQDYDYLNEWGNRFKKLADMYGGG--- |
9 | 3ba6A | 0.06 | 0.04 | 1.99 | 0.83 | DEthreader | | PGGWIRGAIYYFKIAVALAVAA--IPEGLPAVITTCLAGTMAKNAI--TLTTNMAT----FSRDRKSMS-V-YCSPKMRGTTRVPMTG---RDTPPKREEMVLDDSRFMEYETDL--F-------TGDNKGTAIAIRRIGICC---PHKSKIV-------------FSTIVAAVRPRSP |
10 | 1vt4I3 | 0.06 | 0.06 | 2.65 | 0.87 | MapAlign | | -NDPKYERLVNAILDIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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