>P12830 (107 residues) VNEAPIFVPPEKRVEVSEDFGVGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDT GAISTRAELDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILS |
Sequence |
20 40 60 80 100 | | | | | VNEAPIFVPPEKRVEVSEDFGVGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILS |
Prediction | CCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCSSSSSSCCCCCCCSSSCCCCSSSSSCCSCCCCCCCCCCCCSSSSSSSSSSCCCCCCSSSSSSSSSSC |
Confidence | 98798466865999996899999199999999099998732999983699981898599819999342376556434675699999999699397545899999989 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | VNEAPIFVPPEKRVEVSEDFGVGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILS |
Prediction | 84635464644040304472444233130303225435345035313644653364246303030444023232643564303030203464634331403030307 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCSSSSSSCCCCCCCSSSCCCCSSSSSCCSCCCCCCCCCCCCSSSSSSSSSSCCCCCCSSSSSSSSSSC VNEAPIFVPPEKRVEVSEDFGVGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILS | |||||||||||||||||||
1 | 4zpmA | 0.26 | 0.25 | 7.77 | 1.50 | DEthreader | TNNSPAFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSYTSEQLFSIDVTTGEVRVSGTLDYE--E-S--SSYQIYVQATDRGPVPMAGHCKVLVDII | |||||||||||||
2 | 3q2vA2 | 0.86 | 0.86 | 24.21 | 1.77 | SPARKS-K | VNEAPIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLL | |||||||||||||
3 | 4xhzA | 0.24 | 0.22 | 7.00 | 0.39 | MapAlign | -DYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADGLPASRVRYRVDFYPASIFEVEEDSGRVITRVNLNE-----EPTTIFKLVVVAFDDGEPVMSSSATVKILVL | |||||||||||||
4 | 1ff5A2 | 0.26 | 0.25 | 7.77 | 0.26 | CEthreader | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDTYNAAIAYTIVSQDKNMFTVNRDTGVISVLTSLDRESY-----PTYTLVVQAADLQGEGLSTTAKAVITVK | |||||||||||||
5 | 3q2vA2 | 0.86 | 0.86 | 24.21 | 1.76 | MUSTER | VNEAPIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLL | |||||||||||||
6 | 3q2wA2 | 0.47 | 0.47 | 13.61 | 0.85 | HHsearch | VNENPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRES-PNVKNNIYNATFLASDNGIPPMSGTGTLQIYLL | |||||||||||||
7 | 3q2vA2 | 0.87 | 0.86 | 24.21 | 2.17 | FFAS-3D | VNEAPIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVL- | |||||||||||||
8 | 3q2wA2 | 0.47 | 0.47 | 13.61 | 0.53 | EigenThreader | VNENPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRE-SPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLL | |||||||||||||
9 | 3q2vA | 0.86 | 0.86 | 24.21 | 1.69 | CNFpred | VNEAPIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLL | |||||||||||||
10 | 5vh2A1 | 0.28 | 0.27 | 8.27 | 1.50 | DEthreader | NDEAPVFTQQQYNRLLRETAGIGTSVIVVRATDKDTGDGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYE--T-K--TSYLMNVSATDGAPPFNQGFCSVYVTLL | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |