>P12830 (114 residues) NDNKPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKN MFTINRNTGVISVVTTGLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTN |
Sequence |
20 40 60 80 100 | | | | | NDNKPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTN |
Prediction | CCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCCCCSSSSSSSSSSCCCCCCCSSSSSSSSSSSCC |
Confidence | 998996777658999958999982999999982899999987499999934898877588389909985999916889963276689999999699999624799999999739 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | NDNKPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTN |
Prediction | 853553164640504044614441320303021344456552040222025444745444304025733203034550331337514030203354644144403030303548 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCCCCSSSSSSSSSSCCCCCCCSSSSSSSSSSSCC NDNKPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAIAYTILSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTN | |||||||||||||||||||
1 | 5t9tA | 0.31 | 0.30 | 9.02 | 1.50 | DEthreader | DNNAPVFHQASYLVHVAENNPPGTSIAQVSASDPD--L-GSNGLISYSIIASDLEPRALSFVSVNQDSGVVFAQ-RAFDHEQLRSFQLTLQARDHGSPTLSANVSMRVLVGDRN | |||||||||||||
2 | 1ff5A2 | 0.86 | 0.86 | 24.21 | 2.01 | SPARKS-K | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDIN | |||||||||||||
3 | 1ff5A2 | 0.86 | 0.85 | 23.96 | 0.45 | MapAlign | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDI- | |||||||||||||
4 | 1ff5A2 | 0.86 | 0.86 | 24.21 | 0.30 | CEthreader | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDIN | |||||||||||||
5 | 1ff5A2 | 0.86 | 0.86 | 24.21 | 1.85 | MUSTER | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDIN | |||||||||||||
6 | 5wjmA2 | 0.29 | 0.27 | 8.27 | 0.81 | HHsearch | NDNDPVLLNLPMNVTISENSPVSSFVAHVLASDADS---GCNALLTFNITAGNR----ERAFFINATTGIVTVNR-PLDRERIPEYRLTVSVKDNPENPRKDFDLLLVSLADEN | |||||||||||||
7 | 1ff5A2 | 0.86 | 0.86 | 24.21 | 2.20 | FFAS-3D | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDIN | |||||||||||||
8 | 5sznA5 | 0.31 | 0.30 | 9.02 | 0.55 | EigenThreader | NDNPPAFSQTSYSVYLPENNPRGTSIFSVSAHDPDD---EENAKVTYSLVENIQGAPLSSYVSINSDTGVLYAL-QSFDYEQFQNLQMQVKASDNGHPPLSSNVSLSVFLLDQN | |||||||||||||
9 | 3lnfA | 0.87 | 0.85 | 23.96 | 1.87 | CNFpred | NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD-- | |||||||||||||
10 | 6vfvA | 0.28 | 0.27 | 8.31 | 1.50 | DEthreader | ENNAPLFTRPVYEVSVRENNPPGAYLATVAARDRD--L-GRNGQVTYRLLEAEVAGGAVTYVSVDPATGAIYAL-RSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |