>P12830 (121 residues) IQAELLTFPNSSPGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITG QGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTD Q |
Sequence |
20 40 60 80 100 120 | | | | | | IQAELLTFPNSSPGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ |
Prediction | CCCCSSCCCCCCCCSSCCCCCCCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCSSSSSSSCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSSSC |
Confidence | 9110430699998501123454466389974699982087541117899995799999826899987751898179627998024893326579999999979999523158999999819 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | IQAELLTFPNSSPGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ |
Prediction | 8727325236554424344451233303040336454334234334145551403020326436653433030256213020344033643540402020305745525450404030458 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCSSCCCCCCCCSSCCCCCCCCCCSSSSCCCCCCCCSSSSSSCCCCCCCCSSSSSSSCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSSSC IQAELLTFPNSSPGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ | |||||||||||||||||||
1 | 6cv7A | 0.19 | 0.17 | 5.60 | 1.17 | DEthreader | -----FLPCVLVPTRDC--R-PLTYQAAIPELRTPENPILVTPIQAIDRIRPGILYSILVGTP-EDYPRFFHMHPRTAELTLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILD- | |||||||||||||
2 | 1ff5A1 | 0.88 | 0.74 | 20.93 | 1.64 | SPARKS-K | -------------------MDWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQ | |||||||||||||
3 | 6vfvA | 0.15 | 0.13 | 4.44 | 0.42 | MapAlign | ----------------DNAPLFPVYEVSVRENNPPGAYLATVAARDDLGRNGQVTYRLLAEVAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQ | |||||||||||||
4 | 6vfvA | 0.14 | 0.12 | 4.25 | 0.28 | CEthreader | ------------ENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDDLGRNGQVTYRLLEAEVGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQ | |||||||||||||
5 | 1ff5A1 | 0.88 | 0.74 | 20.93 | 1.56 | MUSTER | -------------------MDWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQ | |||||||||||||
6 | 1ff5A1 | 0.86 | 0.71 | 20.02 | 0.83 | HHsearch | -------------------MDWVIPPISCPENEEFPK--NLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQ | |||||||||||||
7 | 1ff5A1 | 0.89 | 0.74 | 20.92 | 1.90 | FFAS-3D | --------------------DWVIPPISCPENEKGEFPKNLVQIKSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQ | |||||||||||||
8 | 2yqgA | 0.35 | 0.32 | 9.62 | 0.53 | EigenThreader | -------GSSGSSGQ---KRAWITAPVALREGEDLSKKNPIAKIHSDLAEERGITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDI | |||||||||||||
9 | 2omxB | 0.97 | 0.83 | 23.17 | 1.64 | CNFpred | ------------------LGSWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ | |||||||||||||
10 | 6cv7A2 | 0.19 | 0.17 | 5.60 | 1.17 | DEthreader | -----FLPCVLVPTRDC--R-PLTYQAAIPELRTPENPILVTPIQAIDRIRPGILYSILVGTP-EDYPRFFHMHPRTAELTLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILD- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |