>P12830 (134 residues) MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDC TGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYAWDSTYRKFSTKVTLNTVG HHHRPPPHQASVSG |
Sequence |
20 40 60 80 100 120 | | | | | | MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYAWDSTYRKFSTKVTLNTVGHHHRPPPHQASVSG |
Prediction | CCCCCHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCSSSCCCCCSSSCCCCSSSSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCC |
Confidence | 99631017899999987542146778878997764699997201246992877778034899985179808997698599659983137617984799999982999679999999814566778876788999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYAWDSTYRKFSTKVTLNTVGHHHRPPPHQASVSG |
Prediction | 72443331010001121333317456414451546413040346315563410403066055465140315155040474020313341514764230302031656552404030334647455544766478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCSSSSSSSCCCCCCCCCSSSCCCCCSSSCCCCSSSSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCC MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLVYAWDSTYRKFSTKVTLNTVGHHHRPPPHQASVSG | |||||||||||||||||||
1 | 2ystA | 0.18 | 0.14 | 4.60 | 1.00 | DEthreader | ----------------------SSGNDNSPRFEKSVYEADLAEN-SAPGTPILQLRAADLDVNGQIEYVFAVRRLRLDTSGWLSVLHRIDREVNQLRFTVMARDRGPKTDKATVVLNIKDENDNVP-------- | |||||||||||||
2 | 4zplA2 | 0.20 | 0.15 | 4.77 | 1.33 | SPARKS-K | -------------------------NDHVPQFSRLVYRAQVPENS-DNGSLVVVVTATDLDTNKQITYSLAENPFLVDPTGEVRLRGPLDFEMIEYDIDIQATDGGGLSAHSKVLVEVVDVNDHH--------- | |||||||||||||
3 | 4xhzA | 0.20 | 0.14 | 4.54 | 0.39 | MapAlign | -------------------------NDYPPVFSKRIYKGMVAP-DAVKGTPITTVYAEDADPASRVRYRVDASIFEVEESGRVITRVNLNEEPTIFKLVVVAFDDGVMSSSATVKILVLHP------------- | |||||||||||||
4 | 4xhzA | 0.17 | 0.17 | 5.63 | 0.28 | CEthreader | LVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPD-AVKGTPITTVYAEDADPASRVRYRVDDVIFEVEEDGRVITRVNLNEPTTIFKLVVVAFDDGEMSSSATVKILVLHPGEIPRFTQEEYRP | |||||||||||||
5 | 1op4A | 0.25 | 0.22 | 6.69 | 1.14 | MUSTER | -------------------EASGEIALCKTGFPEDVYSAVLPKD-VHEGQPLLNVKFSNCNRKRKVQYESEPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETEKWQVAVNLSREPTLTEEPMKEPHEIE | |||||||||||||
6 | 1op4A | 0.25 | 0.22 | 6.69 | 1.09 | HHsearch | -------------------EASGEIALCKTGFPEDVYSAVLPKD-VHEGQPLLNVKFSNCNRKRKVQYESEPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKEQEKWQVAVNLSREPTLTEEPMKFPRHGA | |||||||||||||
7 | 1op4A | 0.26 | 0.21 | 6.46 | 1.36 | FFAS-3D | ----------------------GEIALCKTGFPEDVYSAVLPKD-VHEGQPLLNVKFSNCNRKRKVQYESSEPDFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEWQVAVNLSREPTLTEEPMKEPHE-- | |||||||||||||
8 | 5v5xA | 0.10 | 0.10 | 3.60 | 0.68 | EigenThreader | ILDREQTPGYNVTITATDRGKPPLVNDNAPVFQQQAYLINVAEN--NQPGTSITQVAWDPDVNGLVSYSIDLEFVSVNDSGVVYAQRAFDHEQIRSQLTLQARDQGALSANVSMRVLVDDRNDNAPRTLEPDGS | |||||||||||||
9 | 5dzyA | 0.17 | 0.16 | 5.14 | 1.74 | CNFpred | --------KSGTTTVRIEVV---DINDNAPQFLQSLYAVEVPENS-PLNALVVTVSARDLDAHGNVAYSLFQQPFVIDETGEIRLKGALDFEASYYTMEIVATDSGGLSGKCTVAIQVLDVNDNAPKLTISSLT | |||||||||||||
10 | 6c13A | 0.18 | 0.14 | 4.62 | 1.00 | DEthreader | -------------------------NDYPPVFSKRIYKGMVAPD-AVKGTPITTVYAEDADPPSRVRYRVDASIFDVEDSGRVVTRVNLNEEPTIFKLVVVAFDDGVMSSSATVRILVLHPGEQSIVYSINN-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |