Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCC QRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ |
1 | 6ahfC1 | 0.08 | 0.07 | 2.71 | 1.35 | SPARKS-K | | --QFTERALTILTLAQKLASDHQHPQQPIHILAAIETPEDGSVPYLQNLIEKGRYDYDLFKKVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQLFNDSSIQQIFKEAQVDIEQQALELRNTRIDSRGADTNTPLE------------------------- |
2 | 1g9lA | 0.94 | 0.27 | 7.58 | 1.34 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------GPLGSA-AA-ATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQ |
3 | 6vbu7 | 0.07 | 0.07 | 2.86 | 0.57 | CEthreader | | SEIRGFTKRGKQFLSFETNLTESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKCLPVERLLREVPQGSDVTYEIEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLGLIQITTSKPIHKWEIRNEKKRGGILCVDSFDIVGDGVKDLLVGRDDGMVEVYGFDNANEPV |
4 | 6pfpA | 0.04 | 0.04 | 1.98 | 0.48 | EigenThreader | | PLK----------PEEHEDILNKLLDPELA----QSERTEALQQLRVNYGSFVSEYNDLTKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGSSGKTIHE----LEKVRKQLEAEVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDE |
5 | 4bmlA | 0.17 | 0.16 | 5.30 | 0.42 | FFAS-3D | | --SKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAPQ-EGRVAVLSPRQYYSLISS---VDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTIQTTSGDFNVQYQGDLILAMG- |
6 | 5aftV | 0.07 | 0.06 | 2.43 | 1.27 | SPARKS-K | | -----------------SGNKVSRQSVLCGSQNIVLNGKTIIMCIIRGDLANVRVGRH--CVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRCVLKDCCKILDNTVLPPETVVPPFTVFSG--CPGLFSGELPECTQELMIDVTKSY |
7 | 3qk8A | 0.16 | 0.04 | 1.34 | 0.36 | CNFpred | | IGDYEGRIRIMREARDLVLNLVNLDKPVVSAIGPAVGAGLVVALL--------------------------------------------------------------------------------------------------------------------------------- |
8 | 5zcsE | 0.03 | 0.02 | 1.40 | 0.83 | DEthreader | | CLALQNPEVVALRGLNLERILAPY-------------------SKMGIIATFRSWAG--I--I--N-LCKPGNSGIQSLIGV--LCIPNM-RQILNLEGTLNMAAFDPKRASA-DSQVLQHKENLEWNWN-LIGTILKWPNVNLLV-DIQWLN-SS-----LGTPHKMLIITQD |
9 | 6i5bA | 0.05 | 0.05 | 2.23 | 0.63 | MapAlign | | --SDVHSAWSYPKMLNFKAEDIQYVLLGKPGALKVQELVGKKGTFGVPADDYPSWDAGKGEWEIEVEAIGEGTPWLKPFGYPYNDEGQYVPGKKLADYYTVVSVEGDKEGKLFWPTKHAKNSHHLQYPEWLMTGHAHAQDRCLKCHSAEAYLAKEGTTVTMNDAKLGVTCQVCH |
10 | 4k0mC | 0.14 | 0.13 | 4.50 | 0.87 | MUSTER | | RRSD-----------QNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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