>P11487 (239 residues) MGLIWLLLLSLLEPGWPAAGPGARLRRDAGGRGGVYEHLGGAPRRRKLYCATKYHLQLHP SGRVNGSLENSAYSILEITAVEVGIVAIRGLFSGRYLAMNKRGRLYASEHYSAECEFVER IHELGYNTYASRLYRTVSSTPGARRQPSAERLWYVSVNGKGRPRRGFKTRRTQKSSLFLP RVLDHRDHEMVRQLQSGLPRPPGKGVQPRRRRQKQSPDNLEPSHVQASRLGSQLEASAH |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MGLIWLLLLSLLEPGWPAAGPGARLRRDAGGRGGVYEHLGGAPRRRKLYCATKYHLQLHPSGRVNGSLENSAYSILEITAVEVGIVAIRGLFSGRYLAMNKRGRLYASEHYSAECEFVERIHELGYNTYASRLYRTVSSTPGARRQPSAERLWYVSVNGKGRPRRGFKTRRTQKSSLFLPRVLDHRDHEMVRQLQSGLPRPPGKGVQPRRRRQKQSPDNLEPSHVQASRLGSQLEASAH |
Prediction | CCSHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCSSSSSCCCCCSCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCSSSSSCCCCCSSCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCSSSSCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 94134645666520234568755456556677776555578526788884487389984899572544789331013661457669998413352787779996651343476633899961589447773244777655421012346863599866899614577778888414664245677773101110246788998776765434568998779877667888875565689 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MGLIWLLLLSLLEPGWPAAGPGARLRRDAGGRGGVYEHLGGAPRRRKLYCATKYHLQLHPSGRVNGSLENSAYSILEITAVEVGIVAIRGLFSGRYLAMNKRGRLYASEHYSAECEFVERIHELGYNTYASRLYRTVSSTPGARRQPSAERLWYVSVNGKGRPRRGFKTRRTQKSSLFLPRVLDHRDHEMVRQLQSGLPRPPGKGVQPRRRRQKQSPDNLEPSHVQASRLGSQLEASAH |
Prediction | 42023000000023323634444434454455444253043341312010422110102451414134362443314244353220103114112000015604321453144512031313652100010231434444444444455432000003461433635534764310100323354544733541535344436654544554666645645244254553445355568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCSHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCSSSSSCCCCCSCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCSSSSSCCCCCSSCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCSSSSCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGLIWLLLLSLLEPGWPAAGPGARLRRDAGGRGGVYEHLGGAPRRRKLYCATKYHLQLHPSGRVNGSLENSAYSILEITAVEVGIVAIRGLFSGRYLAMNKRGRLYASEHYSAECEFVERIHELGYNTYASRLYRTVSSTPGARRQPSAERLWYVSVNGKGRPRRGFKTRRTQKSSLFLPRVLDHRDHEMVRQLQSGLPRPPGKGVQPRRRRQKQSPDNLEPSHVQASRLGSQLEASAH | |||||||||||||||||||
1 | 2vseA | 0.07 | 0.05 | 1.93 | 1.00 | DEthreader | --------------ITPWTPRYEIRFNPSTLIEKTNYQTV-KDGTYQVSSKNNKVIEQISTNKVHIFSNDKENQVWNLIYNPLKAYKIKSLKYPYSLAWDSNRTIVAATGDYNDQYWLIERNEDNTYIIRNYENR----------------KIVLDLSTTDNGLLGF-EFHGGINQRWIIKPFSFNSITYNDKKRA------------------------------------------- | |||||||||||||
2 | 3f1rA | 0.43 | 0.28 | 8.22 | 2.82 | SPARKS-K | ------------------------------PGAAQLAHLHGILRRRQLYCRTGFHLQILPDGSVQGTRQDSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIYKHGDT----------GRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERPELYKDLL-------------------------------------------- | |||||||||||||
3 | 3f1rA | 0.42 | 0.26 | 7.62 | 0.87 | MapAlign | -----------------------------------QLAHLHGIRRRQLYCRTGFHLQILPDGSVQGTRQDSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIYKH----------GDTGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERVPELY----------------------------------------------- | |||||||||||||
4 | 3f1rA | 0.42 | 0.27 | 8.00 | 0.69 | CEthreader | ------------------------------PGAAQLAHLHGILRRRQLYCRTGFHLQILPDGSVQGTRDHSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIYKHGDT----------GRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERVPELYKDLL------------------------------------------- | |||||||||||||
5 | 3f1rA | 0.44 | 0.29 | 8.45 | 1.95 | MUSTER | ------------------------------PGAAQLAHLHGILRRRQLYCRTGFHLQILPDGSVQGTRQDSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIY----------KHGDTGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPV---DPERVPELYKDLL---------------------------------------- | |||||||||||||
6 | 3f1rA | 0.43 | 0.28 | 8.10 | 3.55 | HHsearch | ------------------------------PGAAQLAHLHGILRRRQLYCRTGFHLQILPDGSVQGTRQHSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNIYKHGD----------TGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERVPLYKDLL-------------------------------------------- | |||||||||||||
7 | 1nunA | 0.51 | 0.29 | 8.49 | 2.08 | FFAS-3D | ----------------------------------SYNHLQGDVRWRKLFSFTKYFLKIEKNGKVSGTKKECPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLKERIEENGYNTYASFNWQ------------HNGRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVVH------------------------------------------------------- | |||||||||||||
8 | 3f1rA | 0.41 | 0.26 | 7.76 | 0.97 | EigenThreader | ------------------------------PGAAQLAHLHGILRRRQLYCRTGFHLQILPDGSVQGTQDHSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIEQFEENW--YNTYSSNIYKHG----------DTGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERV-------PELYKDLL------------------------------------ | |||||||||||||
9 | 1nunA | 0.51 | 0.30 | 8.60 | 2.97 | CNFpred | ----------------------------------SYNHLQGDVRWRKLFSFTKYFLKIEKNGKVSGTKKNCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLKERIEENGYNTYASFNWQHN------------GRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVVH------------------------------------------------------- | |||||||||||||
10 | 4tlvA | 0.07 | 0.05 | 2.21 | 0.83 | DEthreader | -------------------REYVPEHPRRAYLVDAVPETVSELEDTPVYLRKTFMLQADPNNNVFLVEVN-FPQTIFFWDVY--QRICLKDLTSLSLTAFTTLKVHLSVSAAVNQKWKMTPQDATQFRVSSELLG--------------QTENGLFWNTSQHDLYVCPLKNPLEELQIIVTHA---------------------QLPGQIF-Y-----LKTSKIFFVQNVFFWLFKWYY | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |