>P11474 (423 residues) MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAG PGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNE CEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGP LAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTI SWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAA GLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALL EYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEA MMD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCHHHHHHHHHHSSCCCSSSCCCCCCCCSCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSCCCSSSSCCCCCHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC |
Confidence | 998888999776648999999999988677899867789999888788887778887888888888877778888874412488377732474462566774012044586687489993100311010264554566565277543432101000112222244444444566554433233344444433211012344431244333457876553210133445555447898999999856680359999999999972699999999986225789166239958742221022189999999999999998099999999999997337899998799999999999999999999986789862136899999987589999999999999998523887730899999971049 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD |
Prediction | 610343624122033303124324134442342433232433334434444445544444444444454445545541020010401121000100400230021103462404034554040326314303301142035123344133344434442423422224322222222201110221222121222122222020223221222312222231212121220223201100200120210120224001100210100000000010002252220002210011220100000200310140043037060341000000000001032430513610340052014002300231144522412300010011022013003300210000213350403400120153448 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCHHHHHHHHHHSSCCCSSSCCCCCCCCSCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSCCCSSSSCCCCCHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD | |||||||||||||||||||
1 | 4nqaB | 0.22 | 0.13 | 4.10 | 0.83 | DEthreader | -----------------------------------------------SEQIRKKKIRKQQ--QES------------------------------------------------------------------------------------------------------------------Q-SGEGEGVQLTAAQELMIQQLVAAQLCNSFDQPVTPWPLGAAQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR-PQ--DQ-LRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKK-LPPLLSEIWD---- | |||||||||||||
2 | 4nqaB | 0.26 | 0.22 | 6.63 | 2.53 | SPARKS-K | -----------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGSGEGEGVQLTAAQELMIQQLVAAQLQCNVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQL----RFPRMLMKLVSLRTLSSVHSEQVFALRLQDK-KLPPLLSEIWD---- | |||||||||||||
3 | 3dzyA | 0.35 | 0.25 | 7.48 | 1.34 | MapAlign | ---------------------------------------------------------------------------KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEE-----------------------RQRGKDRNENEVESTSSANEDMVERILEAELA----------------PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKY----PEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML----- | |||||||||||||
4 | 3dzyA | 0.35 | 0.25 | 7.48 | 0.75 | CEthreader | ---------------------------------------------------------------------------KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENE--------------------VESTSSANEDMP--VERILEAELA----------------PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTEVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYP----EQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEML----- | |||||||||||||
5 | 4nqaB | 0.26 | 0.21 | 6.51 | 2.26 | MUSTER | -----------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGGSGEGEGVQLTAAQELMIQQLVAAQVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR----PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIWD---- | |||||||||||||
6 | 4nqaB | 0.26 | 0.22 | 6.63 | 3.28 | HHsearch | -----------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQPVGPQGSQGSEGEGVQLTAAQELMIQQLVAAQLQCVTPWADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRP----QDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDK-KLPPLLSEIWD---- | |||||||||||||
7 | 4nqaB | 0.26 | 0.22 | 6.63 | 3.15 | FFAS-3D | -------------------------------------KKGPAP----------------------------KMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRCRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSQGSGEGEGVQLTAAQELMIQQLVAAQLLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR----PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-KKLPPLLSEIWD---- | |||||||||||||
8 | 4nqaB | 0.22 | 0.18 | 5.67 | 1.73 | EigenThreader | -------------------------------------------------------------------KKGPAPKMLGHELCRVCGDKASGYNVLSCEGCKGFFRRSVVRGGAYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRALQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQ----LRFPRMLMKLVSLRTLSSVHSEQVFALRLQ-DKKLPPLLSEIWD---- | |||||||||||||
9 | 5uanB | 0.31 | 0.22 | 6.72 | 1.92 | CNFpred | -----------------------------------------------------------------------------PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVR---------------------------------TAELDDLTEKIRKAHQETFPSLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRP----SKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE---- | |||||||||||||
10 | 3e00D | 0.16 | 0.09 | 3.15 | 0.83 | DEthreader | ----------------------------SGFHYGV-----------------------------------LAVG-------------S----------------------------------------------------------------NAIRF---------------------SDIDQLNPESADLRALAKHLYDSYIKSFPLTK--FILMGEDEVARIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLM-N-KDGVLISEGGFMTRFLKSLRPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPE---SS-QLFAKLLQKMTDLRQIVTEHVQLLQVIKKETDMSLHPLLQEIYKDLY- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |