>P11226 (248 residues) MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKG EPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMA RIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKE EAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSH LAVCEFPI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI |
Prediction | CCHHHHHHHHHHHHHHHCCCCCSSHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCSSSCCCSSSSSCCCCCHHHHHHHHHHHCCSSCCCCCHHHHHHHHHHHCCCSSSSSSCCCCCCSSSSCCCCSCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCSSSSSSSCC |
Confidence | 94588999999999863035310111014677754225788999999999999999999999999999999998889999888777899754456776543221100101110012210133442246882784472799845541089999999982997836599999999999753863787430575774998489916534589998999899846179938997545368987226887309 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI |
Prediction | 33323321020000013323343325544631303001124137144167256166175244063353471551541442342324242242343343332322322232222214233541433223420321322101002434212202410362313103041550150025225430000011455524030224341403343541413445410101014434313344745320335347 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHCCCCCSSHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCSSSCCCSSSSSCCCCCHHHHHHHHHHHCCSSCCCCCHHHHHHHHHHHCCCSSSSSSCCCCCCSSSSCCCCSCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCSSSSSSSCC MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQGPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI | |||||||||||||||||||
1 | 1fifA | 0.47 | 0.28 | 8.22 | 0.83 | DEthreader | ----------------------------------------------------------------------------------------------AIE--VK--LANMEA-EINTLKSKLELTNKLHAFS-MGKKSKKFFVTNHERMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLTYSNWKKDQPDDWYGGEDCVHIVDNGLWNDDSCQRPYTAVCEFPA | |||||||||||||
2 | 5ao5A | 0.18 | 0.17 | 5.67 | 0.89 | MapAlign | ---CRTLGDQLSLLLWRIYGSEEDLCALPYHEVYTIQGNSHGKPCTIPFKYDNQWFHGCTSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCETFWDKDQLTDSTEIHEQTYINGLLCKKKPKVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKIKVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDSEDCVTIWGPGRWNDSPCNQSLPSICKKAG | |||||||||||||
3 | 1hupA | 1.00 | 0.57 | 15.92 | 2.63 | SPARKS-K | -----------------------------------------------------------------------------------------------------------AASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI | |||||||||||||
4 | 5ao5A | 0.13 | 0.11 | 3.90 | 1.17 | EigenThreader | GTMGW----------------PGTASLGMYECDREALNLRWHCRTLGDQLSLLLGAGQWGSEEDLCALPYHEVYTIQGNSHGKPCTIPGCTSTGREDGHLTQDYGKDE----------------RDCETFWDKDQDSCYQFNFQSLSWREAWASCEQQGADLLSITEIHEQTYINGLLTSTLWIGLNDLDTSGGWQWSDNSPLKYLNWESDQPDNPSEE-NCGVIRTESSDCSI----ALPYVCKKKP | |||||||||||||
5 | 2ricC | 0.41 | 0.26 | 7.59 | 0.51 | CEthreader | -------------------------------------------------------------------------------------------ADIGSDVASLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVEAAFLSMTDSKTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF-- | |||||||||||||
6 | 7jptA6 | 0.07 | 0.06 | 2.48 | 1.10 | EigenThreader | -------------------DKMCPPDEGWKRHGETCEDEVPFGTNCNLTIVDSCGEYNTVGGRRRAVTFSNWNFLEPASPGGTGKSVGKCRSFKALSMSGPLGPEEA-----------------SPKPWQSFPASLSCYKVFVRKRNWEEAERFCQALGAHLSSFSHVDEIKEFLHFLTHWLWIGLNKRSLQGSWQWSDRTPVSTIIM-PNEFQQDYDIRDCAAVKVFHRHFYDFIYLRPFACDTKLE | |||||||||||||
7 | 1hupA | 1.00 | 0.57 | 15.92 | 1.94 | MUSTER | -----------------------------------------------------------------------------------------------------------AASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI | |||||||||||||
8 | 5ao5A | 0.20 | 0.17 | 5.43 | 1.29 | HHsearch | RENLRGDQ--LSLLLG--AGQRIY-GSEEDLCPYIGLNDLDTSGGWQW---SDNSPLKYLNWES---------------------------DQPDNP-SEENCGVIRTEGGWQNRSIALPYVPKVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFDSLEDCVTIWPEGRWNDSPCNQSLPSICKKAG | |||||||||||||
9 | 1hupA | 1.00 | 0.57 | 15.92 | 1.38 | HHsearch | -----------------------------------------------------------------------------------------------------------AASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI | |||||||||||||
10 | 1hupA | 1.00 | 0.56 | 15.69 | 2.13 | FFAS-3D | -------------------------------------------------------------------------------------------------------------SERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |