Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSCCCCCCCCCCCCCCCCCCCSCCCCCCCSCCCCCCHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCHCHHCCCCCCCCCCCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCHHHHHCCCCCCCCCSCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCC MMTAKAVDKIPVTLSGFVHQLSDNIYPVEDLAATSVTIFPNAELGGPFDQMNGVAGDGMINIDMTGEKRSLDLPYPSSFAPVSAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGILQGVTSPASTTASSSVTSASPNPLATGPLGVCTMSQTQPDLDHLYSPPPPPPPYSGCAGDLYQDPSAFLSAATTSTSSSLAYPPPPSYPSPKPATDPGLFPMIPDYPGFFPSQCQRDLHGTAGPDRKPFPCPLDTLRVPPPLTPLSTIRNFTLGGPSAGVTGPGASGGSEGPRLPGSSSAAAAAAAAAAYNPHHLPLRPILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSASVPAPSTASCSGGVQPGGTLCSSNSSSLGGGPLAPCSSRTRTP |
1 | 1vt4I3 | 0.08 | 0.08 | 3.27 | 1.51 | CEthreader | | RLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
2 | 1slyA | 0.08 | 0.08 | 3.01 | 0.73 | EigenThreader | | LMNQ-----PAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKS--------QPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIG |
3 | 1p47A | 0.94 | 0.17 | 4.83 | 0.99 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ----------------------------------------------------- |
4 | 6zywY | 0.06 | 0.06 | 2.56 | 1.05 | SPARKS-K | | KIDFKDTISFKLTPYFFMVRIEQKNIKSQILNLVFAESFILQELTKEIPYFDLWNCQNDYSEKIEKMKKRILWEPLGKQISDELPKNRIFVQTGR---KSNYGFDIPIMQASYYMHELGLRIETQRLGWFILFFKEMKEIQITQKMNHTWLIFKVDSNITFNSISKDTIALEFTGDALEQSFQIKYEYQVDIPMKDLKLSAYKNLQISQAITPVENHIGVILVNGSYCSKRKFAENLIRFGSDNNLRLHLYKFDLNEMSELTEKSYLSGLLKFASEKKIQNTDVIVASVPHFINTKILIDYFSKSEKISNAFYIRTIATKININN-----IYSNFNKNPVNNVFTYGVEGYSQFLLLDTYIYKIMNNIL-------NTFISEQNNRLKYSVQYDLLTSNGPSSVVPFKLPILREKIRDLIYKKILQNGQAIKIDDSKLKEGLEEITITPNYFIERTVKVDAKEFTEELNGVSFKNV |
5 | 2cshA | 0.27 | 0.06 | 1.80 | 1.71 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEASGPSSG---------------------------------- |
6 | 6uebA | 0.07 | 0.05 | 2.09 | 0.67 | DEthreader | | ---------------DYNLN--TDNCRSFRLKDYFKKVD--------LGSLKVGMAASMWGLLIVTKFVYSQS-NC------------LFDRNYTLMLDLNSGEVILCYRHWGHPY--PKPKERELKIE-------FALTMDVKLKILVLIYGKT-----RARVSCVNALTAQ--------M-DFLLSVQAVFHLLFRVYILMSRIIYLDPSLGGISGM-----FWRIWLSSQESWIHA------------GVWPCSSVPHP-GSST-S--ESINWFITRD-------------------PL-EEA-PVFKRTGSARSSEGGYSSV--CPNLLSHISVSTDMSLFFLMYAQTRDTFPSYIMRE-------GTHPLPPSIMVSDLDSIWEKPS----------------YFQSVQKQVNMSYDLIILYLVFKTGFITQVFSPKSEMQRASLN-LCSMYFARLHDLYNSIYKTTRL-- |
7 | 1vt4I3 | 0.09 | 0.08 | 3.24 | 2.11 | MapAlign | | --NDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---- |
8 | 5v3jE | 0.17 | 0.10 | 3.18 | 1.34 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDS-----------HLLRHQSVHTGETPYKCKE--CGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--------------------------- |
9 | 1p47A | 0.94 | 0.17 | 4.83 | 1.29 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ----------------------------------------------------- |
10 | 7bjpA | 0.07 | 0.07 | 2.81 | 0.70 | CEthreader | | AVATGTQPSAPAMATLATAATGTMPEEWKTFFSYYTTVNWSTTDETGKVLFVQGLSPRMNPFLDHLAKMYTGWSGSMEIRFTISGSGVFGGKLAAVMVPPGIGTEGGTSLLQFPHVLVDARQTEPVIFNIPDIRTVLW----HDMHDTLTAHLVILVYNDLLNPYQTSCTVTVETRGGTDFEFHLLKPPSRKMIFGADPSRLIPKKSMFWEGNRLPGEFKGFSIKPLVFQANRHFDCKRQTFGWSTPEHAGVKLNIQRQNLDTEDKTDIGVHLVYGRNIILANTTASFGEVSEAMLGTVVPYRVSGKLEWRHLPEIAFANGTAKNSTIVCGKYLTGNFYVGGNFTQQGNVVVYPAFWTSKHGDTKCIGEDEDMVKRIDVLPQAQTTGGNYPIYYVTEFPAAYLPAPRVYNSQLLWTSRLLAQDVYDIGPEALAKIKDSAGNWFDIGISCEGFSFVGAPTLPFSSLQFPLEASYVGM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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