>P0DP72 (91 residues) GPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVWLRDHTQVHTGPTYVIAR AGRVHTGLYTCLARNSYLDTRTQTTVQLTIY |
Sequence |
20 40 60 80 | | | | GPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVWLRDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIY |
Prediction | CCCCCSSSSCCCCCCCCCSSSSCCCCSSSSSSSSCCCCCSSSSSSCCSSCCCCCSSSSCCCCHHHCSSSSSSSSSCCCCCSSSSSSSSSSC |
Confidence | 9989979707864147874993794299999820129988999999999479987998666823168999999968877468999999989 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | GPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVWLRDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIY |
Prediction | 8565240334344344763414445514653415443324036336655156544040450457344443330304345554434040304 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCCCCSSSSCCCCCCCCCSSSSCCCCSSSSSSSSCCCCCSSSSSSCCSSCCCCCSSSSCCCCHHHCSSSSSSSSSCCCCCSSSSSSSSSSC GPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVWLRDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIY | |||||||||||||||||||
1 | 5lf5A | 0.30 | 0.27 | 8.34 | 1.33 | DEthreader | VKYPPVIVE-M--NS--SVEAIEGSHVSLLCGADSNPPPLLTWMRDGMVLREALYLDLEEVTPGEDGVYACLAENA-Y-GQDNRTVELSVM | |||||||||||||
2 | 5oyjC1 | 0.21 | 0.21 | 6.62 | 1.18 | SPARKS-K | LAEKPFVAFG--SGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY | |||||||||||||
3 | 2fboJ | 0.20 | 0.19 | 5.96 | 0.53 | MapAlign | --SIMTVRT-----THTEVEVHAGGTVELPCSYQLDQPPVISWLKGSTKVFKGPTLRLTHVHPQDGGRYWCQVAQWSF-GLDAKSVVLKVT | |||||||||||||
4 | 1cs6A3 | 0.24 | 0.22 | 6.87 | 0.30 | CEthreader | RQYAPSIKA----KFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGWLSSEPLLHIQNVDFEDEGTYECEAENIKG--RDTYQGRIIIH | |||||||||||||
5 | 5uv6A2 | 0.25 | 0.23 | 7.14 | 1.22 | MUSTER | --VPPQIMNIS-----SDITVNEGSSVTLLCLAIGRPEPTVTWRHLSGFVSEDEYLEISDIKRDQSGEYECSALNDVAAP-DVRKVKITVN | |||||||||||||
6 | 6iaaA2 | 0.19 | 0.18 | 5.67 | 0.40 | HHsearch | --APPQFVVRPRDQI-----VAQGRTVTFPCETKGNPQPAVFWQKEGSQNLPTGDLTITNIQRSDAGYYICQALTVAGSILAKAQLEVTDV | |||||||||||||
7 | 2v5tA1 | 0.13 | 0.12 | 4.18 | 1.61 | FFAS-3D | --SMLTFREVV-----SPQEFKQGEDAEVVCRVSSSPAPAVSWLYTTFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV- | |||||||||||||
8 | 5oyjC1 | 0.18 | 0.18 | 5.70 | 0.33 | EigenThreader | EKPFVAFGSGMES----LVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY | |||||||||||||
9 | 5oyjC | 0.21 | 0.21 | 6.62 | 1.36 | CNFpred | LAEKPFVAFGS--GMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLEAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY | |||||||||||||
10 | 6efyA | 0.22 | 0.21 | 6.59 | 1.33 | DEthreader | AVIPPDFISEDT-SS--DVIVPEGSSVRLTCRARGYPEPIVTWRREGNPSFRGEVLKLSKISRNEMGSYLCIASNG-VPPSVSKRISLSIH | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |