Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSCCCCCCCSSSHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHCHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC MSRPRNNPQTSSPQDSTKDGSSFHYFQGRFELSGKSRQYPADALEPQPGIGDVKVIEKATKSMLDPAQRSHFYLVTPSLVFLCFIFDGLHKALLSVGVSKRSNIVIGNENKETGTLYASKFEDVLPTFTALEMSSILRHCCDLIGIAAGSSDPICTNSLQVQRQFKAMMISIGRPLHSESADLLISYNAGPAIDWINSRPWVGGLMFTFLFGEFESPACELLDQVKVVASKAQMMTYYTVRMFLDQCVDGSTALPAVVLEIPVFEQKKPLAKKVLGDFFEFGGVLRHPVIGVLSPQMFPNLATAANYWAKRRNSTFSGFEALDIIPGSTITFPVLQMASAQKISRGSDMDPYTLNILRGYGISGFE |
1 | 6ez8A | 0.07 | 0.05 | 2.21 | 0.83 | DEthreader | | FQPEPWHIHEQPLDLGLLCVHFILEAVAVQPGEQ-LLS-MVAEMVESL------QSVLALHNVPAFLTPLLRNI--------------------FKEFIYRINTGWTSRT-QFEETWATLLLNVVQAITSLVLSAMTVSCLEQQ-QQSRNITHLYQA--WD-PVPS--L-----T--T--G--AL-ISHEKLLLQINPRELGSMSYKLGQLVQYPSRVGSQQHVLVCSIIYHCLRAMAALGMRVSVLFDR--I-------------------------------K--------GFPCEARVVARILPQFLDDFPDIMNKGESNQQPYPQAFSLSCFFVSAS-TSPWV-AA-ILPHVISRMG----- |
2 | 1pp1X | 0.40 | 0.35 | 10.32 | 1.92 | SPARKS-K | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRD-FHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLLIGVVISSSKIKAGAEQIKKRFKT--AALNRPSHGETATLLQ-FNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKE-FDQIKLVASYAQ-TTYTTIKEYLAECD-ATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENST--------IQPGASVKETQLARYRRREISRGEDGAELSGEISAKIGVTGLN |
3 | 1pp1X | 0.33 | 0.27 | 8.22 | 1.11 | MapAlign | | ---------------------------------------------PHPGIGHEKDIRQNAVALLDQSRR-DFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLLIGV--VIGSSSKIKAGAEQIKKRFKTAALNRPSHGETATLLQFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEF--DQIKLVASYAQTTYTTIKEYLAECDATLTI-PVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKE--------NSTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIKIGVTGL |
4 | 1pp1X | 0.40 | 0.36 | 10.47 | 0.98 | CEthreader | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRD-FHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLLIGVVGSSSKIKAGAEQIKKRFKT--AALNRPSHGETATLLQ-FNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEF-DQIKLVASYAQ-TTYTTIKEYLAEC-DATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENST--------IQPGASVKETQLARYRRREISRGEDGAELSGEISAKIGVTGLN |
5 | 1pp1X | 0.40 | 0.35 | 10.32 | 1.56 | MUSTER | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRDF-HTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLLIGVVISSSKIKAGAEQIKKRFKTA--ALNRPSHGETATLLQ-FNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKE-FDQIKLVASYAQ-TTYTTIKEYLAEC-DATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENST--------IQPGASVKETQLARYRRREISRGEDGAELSGEISAIIGVTGLN |
6 | 1pp1X | 0.40 | 0.36 | 10.47 | 9.90 | HHsearch | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRD-FHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLIGVVIGSSSKIKAGAEQIKKRFKT--AALNRPSHGETATLLQ-FNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEF-DQIKLVASYAQ-TTYTTIKEYLAEC-DATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKEN--------STIQPGASVKETQLARYRRREISRGEDGAELSGEISAKIGVTGLN |
7 | 1pp1X | 0.41 | 0.36 | 10.61 | 3.26 | FFAS-3D | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRD-FHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFKTTQRDLTELEISSIFSHCCSLIGVVIGSSSKIKAGAEQIKKRFKT--AALNRPSHGETATLLQ-FNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKE-FDQIKLVASYAQ-TTYTTIKEYLAEC-DATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENST--------IQPGASVKETQLARYRRREISRGEDLSGEISAIK--IGVTGLN |
8 | 6hwhV | 0.08 | 0.07 | 2.83 | 0.83 | EigenThreader | | LLARRPFPQRLGPRWTLLYKLVTTTDLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLVVPLQIGAP-----DVAFPRLNALSFWLFLFGASIALGGFLAPGGPADFGWTAYTPLSNSPGAGGDLWIFGLIVGGLGTILGAVNMITTVVCMRAPGMIMF-----------------------------RMPIFTWNILVTSVIVLVAFPLLTNGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSFETPMLFSVGFLVTFLLGGLTGVILLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRLGKLHFWLTLIGFHTTWLGAEGMPRRYADYNIVSTIGSFILGVSML |
9 | 1n93X | 0.40 | 0.36 | 10.63 | 2.68 | CNFpred | | ------------------------------KLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFYTTQRDLTELEISSIFSHCCSLLGVVIGSSSKIKAGAEQIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEFMDQIKLVASYAQMTTYTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKEN--------STIQPGASVKETQLARYRRREISRGEDGAELSSAIMKMIGVTGLN |
10 | 6w2jA | 0.05 | 0.04 | 1.79 | 0.83 | DEthreader | | QLRRTSVVHLIEVNASSLASATGYPLIAIPLPEIKNVVSAEPIDTTNYLV--------------------GPYHSSVEFDWCAVSSIRTLRQLGKKTVVKLYFEELSLE--RILDIYHQEACG-----GC--I-ISVG--GQ---------------------IPNNLAVPPLIDRDRSIFKARVLTKFAGVHSGDATLSRSFVSFIVATVMGENVDEKHLPTL--PIIPADYVAIKA-------------------EM-AS--TGEVA---------CFGEGTAFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEG--FKLFATETSDTPVAWP-SQEGQNLSSIRKLIDGSIDLSI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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