Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MALPRSQGHWSNKDILRLLECMENNRPSDDNSTFSSTQSHMDWGKVAFKNFSGEMCRLKWLEISCNLRKFGTLKELVLEAKKCVKKMNKSQKYRNGPDFPKRPLTAYNRFFKESWPQYSQMYPGMRSQELTKILSKKYRELPEQMKQKYIQDFRKEKQEFEEKLARFREEHPDLVQKAKKSSVSKRTQNKVQKKFQKNIEEVRSLPKTDRFFKKVKFHGEPQKPPMNGYHKFHQDSWSSKEMQHLSVRERMVEIGRRWQRIPQSQKDHFKSQAEELQKQYKVKLDLWLKTLSPENYAAYKESTYAKGKNMAMTGGPDPRLKQADPQSSSAKGLQEGFGEGQGLQAAGTDSSQTIWVNCHVSMEPEENRKKDREKEESSNSSDCSSGEEIEVDV |
1 | 3tq6A | 0.21 | 0.10 | 3.24 | 1.91 | FFAS-3D | | -----------------------------------------------------------------------------------------------LASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTL-----------------LGKPKRPRSAYNVYVAERFQE--AKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
2 | 3tq6A | 0.23 | 0.11 | 3.59 | 1.51 | SPARKS-K | | ---------------------------------------------------------------------------------------------SVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTP----------------SQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKR-PRSAYNVYVAERF--QEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
3 | 3tq6A | 0.23 | 0.11 | 3.44 | 1.05 | CNFpred | | -------------------------------------------------------------------------------------------------SCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDK----------------HLKRKAMTKKKELTLLGKPKRPR-SAYNVYVAERF--QEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
4 | 3tq6A | 0.22 | 0.11 | 3.45 | 1.26 | MUSTER | | ---------------------------------------------------------------------------------------------SVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEK-----------EIMDKHLKRKA-----MTKKKELTLLGKPKR-PRSAYNVYVAERFQ--EAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
5 | 3tq6A | 0.22 | 0.11 | 3.38 | 2.83 | HHsearch | | ---------------------------------------------------------------------------------------------SVLASCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEK-----------EIMDKHLKRK-----AMTKKKELTLLGKPKR-PRSAYNVYVAERFQE--AKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
6 | 2yrqA | 0.16 | 0.07 | 2.21 | 1.63 | FFAS-3D | | --------------------------------------------------------------------------------------SGSSGMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDANFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY--------------------------------------IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK------------------------------------------------------------------------------------------------------- |
7 | 5jghA | 0.25 | 0.10 | 3.07 | 1.12 | SPARKS-K | | -----------------------------------------------------------------------------------KASKRTQLRNELIKQGPKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFDEKL-------------------------------------------------PPKKPAGPFIKYANEVRSQVFAPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYNARYPL----------------------------------------------------------------------------------------------------------- |
8 | 3tmmA | 0.23 | 0.11 | 3.44 | 1.05 | CNFpred | | -------------------------------------------------------------------------------------------------SCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDK----------------HLKRKAMTKKKELTLLGKPKRPR-SAYNVYVAERF--QEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQMIEVGRKDLLRRTIKK--------------------------------------------------------------------------------------- |
9 | 2yrqA | 0.16 | 0.07 | 2.28 | 1.01 | MUSTER | | ------------------------------------------------------------------------------------GSSGSSGMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDANFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY--------------------------------------IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG------------------------------------------------------------------------------------------------------ |
10 | 2yrqA | 0.17 | 0.07 | 2.35 | 2.47 | HHsearch | | ------------------------------------------------------------------------------------GSSGSSGMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET-------------------------------------KKKFKDPNAPKR-PPSAFFLFCSEYRPKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG------------------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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