>P09871 (119 residues) CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNC LDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP |
Sequence |
20 40 60 80 100 | | | | | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP |
Prediction | CCCCCSCCCCSSSSCCCCCCCCCCCCSSSSSSSSCCCCSSSSSSSSSSSSSCCCCCCCCCCSSSSSCCCCCCSSCSSCCCCCCCSSSSSCCCSSSSSSSSCCCCCCCCSSSSSSSSCCC |
Confidence | 97972637965997999986898998089999948994899999865677314889988656999936997176222877899828998299799999989988888679999996499 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP |
Prediction | 87453345750403013237664544404233414543302020333304034454352224202323456431401144345444030424433446321423445434043414648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCSCCCCSSSSCCCCCCCCCCCCSSSSSSSSCCCCSSSSSSSSSSSSSCCCCCCCCCCSSSSSCCCCCCSSCSSCCCCCCCSSSSSCCCSSSSSSSSCCCCCCCCSSSSSSSSCCC CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP | |||||||||||||||||||
1 | 4losA | 0.99 | 0.99 | 27.77 | 1.50 | DEthreader | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMV | |||||||||||||
2 | 4lmfA3 | 1.00 | 0.99 | 27.76 | 2.26 | SPARKS-K | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPM- | |||||||||||||
3 | 4losA | 1.00 | 0.99 | 27.76 | 0.97 | MapAlign | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPM- | |||||||||||||
4 | 4losA | 1.00 | 1.00 | 28.00 | 0.74 | CEthreader | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP | |||||||||||||
5 | 4lmfA3 | 1.00 | 0.99 | 27.76 | 2.28 | MUSTER | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPM- | |||||||||||||
6 | 2qqmA | 0.29 | 0.28 | 8.45 | 2.34 | HHsearch | CS-QNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFE--SFDLEPDGGMFCRYDRLEIWDGFPHIGRYCGQKT--PGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSS | |||||||||||||
7 | 4lmfA3 | 1.00 | 0.99 | 27.76 | 1.94 | FFAS-3D | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPM- | |||||||||||||
8 | 6f1cA2 | 0.36 | 0.35 | 10.50 | 0.98 | EigenThreader | CSSELYTEASGYISSLEYPRSYPPDLRCNYSIRVERGLTLHLKFL-EPFDIDDHQQVHCPYDQLQIYANGKNIGEFCGKQR--PPDLDTSSNAVDLLFFTDESGDSRGWKLRYTTEIIK | |||||||||||||
9 | 4losA | 1.00 | 1.00 | 28.00 | 2.27 | CNFpred | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMP | |||||||||||||
10 | 4lmfA3 | 1.00 | 0.99 | 27.76 | 1.33 | DEthreader | CSGDVFTALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPM- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |