>P09871 (174 residues) MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE LSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERF TGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN |
Prediction | CSSSSSSSCCCCCCSSSCCCSSSSCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSSSSSSCCCCCCCCSSSSSSCCCCCCCCSSSSSCCCCCCCCCCCSSSSCCCSSSSSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSCCCCCCCCCC |
Confidence | 914776642662772407865994899986899997289999928995899999789825789978639999449988886436652999999875169978921475788156456752133212211036777776656789998872897787068995655897757789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN |
Prediction | 300000001012223344440302012134643543402330403652302020430301424403202010223444423200221144343443430313233020102033333442333333333333443343333414320412233240403420321445634658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CSSSSSSSCCCCCCSSSCCCSSSSCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSSSSSSCCCCCCCCSSSSSSCCCCCCCCSSSSSCCCCCCCCCCCSSSSCCCSSSSSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSCCCCCCCCCC MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||||||||
1 | 4losA | 0.16 | 0.14 | 4.58 | 1.17 | DEthreader | -------VNCSGDVF-TALIGEIASPNYPKPYPENSRCEYQIRLEKGFQVVVTLRDFDVEAASGNCLDSLVFVAG-DRQFGPYCGH------GFPGPNIETKSNALDIIFQTDLTG-Q-KKGWKLRYHGDPMPCP----KEDTVWEPAK-VFRDVVQITCLFVF-KWS--KCQP | |||||||||||||
2 | 1nziB | 0.98 | 0.88 | 24.64 | 2.42 | SPARKS-K | -----------------TMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCG-QRSSNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
3 | 4lmfA | 1.00 | 0.90 | 25.26 | 1.11 | MapAlign | -----------------TMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
4 | 4lmfA | 1.00 | 0.91 | 25.43 | 0.90 | CEthreader | ----------------PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
5 | 1nziB | 1.00 | 0.90 | 25.10 | 2.16 | MUSTER | -----------------TMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSS-NPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
6 | 1nziB | 1.00 | 0.90 | 25.10 | 2.32 | HHsearch | -----------------TMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSS-NPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
7 | 1nziB | 0.98 | 0.88 | 24.64 | 2.09 | FFAS-3D | -----------------TMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNPHS-PIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
8 | 3demA | 0.45 | 0.40 | 11.59 | 1.17 | EigenThreader | -----------------NMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKE---LSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE | |||||||||||||
9 | 6f1cB | 1.00 | 0.91 | 25.43 | 2.86 | CNFpred | ----------------PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVN | |||||||||||||
10 | 3demA | 0.41 | 0.35 | 10.32 | 1.00 | DEthreader | --N---------------MFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSYLCEYDYVKVETE-DQVLATFCGRETTDTEQTPGEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECK--E--CDHYCHNY-IGGYYCSCRFGYILHDNRT---NP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |