Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDSVTKAEKRKPAHRALFRSCLRCPRPTLAQRERNQASWSSSRRSTSTTGKPSQATGPSANWAKAEQLTTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEFSAEETEETFVKAETEKSDYDTPNYLLSPAAAHRPKSQKCVAYKFRLVVKADGNQETNNGCHKVKIMPCPFPVAKEPSTKGLNPNPSHQM |
1 | 5jcss | 0.08 | 0.08 | 3.06 | 1.26 | SPARKS-K | | DIASSRISLFLTQHVP------TLENLDDSIRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLLVGETAKMLAKKLTVINVSQQTETGDKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADF |
2 | 2pffA1 | 0.16 | 0.13 | 4.28 | 1.05 | HHsearch | | IDSKSEFAHRIMLETRPAQVPMSPN-HGTFGGETLFNRWHSESWANQLTVC-----GAIIGWTRGTGLMSANNIIAEGIEKGVRTFSQKEMAFNLLGLLTP-------E-VVELCQKSPVMADLNGGLQ-FVPEL-------KEFTAKLRKELVETSEVRK-----AVSI-------ETALEHKVVNGN----- |
3 | 1vt4I3 | 0.04 | 0.04 | 1.97 | 0.52 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 3kwsA | 0.07 | 0.07 | 2.79 | 0.48 | EigenThreader | | APGESLNEKLDFEKLGVVGFEPGGGGLAGRVNEIVSAICAGFKGFILSTDKECDTKEIIAAAGELGSTGVIIVPAFNGQVPALAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINVRCGDFWHTWEETSDGAFISGGEYL---QHVHVASRKRRSPGEDGDADNYFECGCQGDRNVVVPAAVKLLREQWEQ |
5 | 3tb8A | 0.15 | 0.12 | 4.00 | 0.41 | FFAS-3D | | --------------------------------------WPAVRRMRRAEPAADGVGAASRDLEKHGAITSSNTAAEAQEEEKVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRYHTQGYFQNYTPGPGIRYPLTFGWCYKLVVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLDSRLAFH- |
6 | 6rlbC | 0.07 | 0.07 | 2.81 | 1.09 | SPARKS-K | | LNTSLPFLQTSRVQRQMVVSVHDLPEKSFVPLLDSKYVWDIWQPSGPQKVLICESQVTCCCLSPLKLLFAGTAHGSEDSRLHYSVTLFWTFRTATSTDGILTSVNHRSPLQAVEPISTSVHKKQSFVLSPFSTQEEMSGLSFHSLDESGVLVVELPKADIAGSISDLGLMPGGRVKLTTQTLNVKFLPSDPNHF |
7 | 2qhrL | 0.15 | 0.03 | 1.04 | 0.19 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------FMASSFLHLTSDQWRS-------HNSFTCQVTHEGDTVEKSLSPAE---- |
8 | 7c6oA | 0.04 | 0.03 | 1.58 | 0.67 | DEthreader | | --KPAAASGDDD---VGLTPILIECGNPALRAGLVLMVQPPRG------PPSHHYLAAYRWLDGAAVVHLHGNLWLPG--------DGEGALVVALDGRFIPAGRNF-YSVDPGTAMAGDIAEVLLLIDVTVRIIFGS-KPGTYGALSDFAALHMAGLVLLETEGD---------------------------- |
9 | 1vt4I3 | 0.04 | 0.04 | 1.94 | 0.82 | MapAlign | | ------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 4k0mC | 0.09 | 0.09 | 3.34 | 0.88 | MUSTER | | VYTIDEAATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKI-----KEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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