Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSSSCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCSHHHHCHHHHCCCCCCCCCCSSSSSSCCCCCSSSSSSSCCCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSCHCHHHHHHHHHHHCCCCCCSSSSSSSCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHCCCCSSSSSCCCCCSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MNAMLETPELPAVFDGVKLAAVAAVLYVIVRCLNLKSPTAPPDLYFQDSGLSRFLLKSCPLLTKEYIPPLIWGKSGHIQTALYGKMGRVRSPHPYGHRKFITMSDGATSTFDLFEPLAEHCVGDDITMVICPGIANHSEKQYIRTFVDYAQKNGYRCAVLNHLGALPNIELTSPRMFTYGCTWEFGAMVNYIKKTYPLTQLVVVGFSLGGNIVCKYLGETQANQEKVLCCVSVCQGYSALRAQETFMQWDQCRRFYNFLMADNMKKIILSHRQALFGDHVKKPQSLEDTDLSRLYTATSLMQIDDNVMRKFHGYNSLKEYYEEESCMRYLHRIYVPLMLVNAADDPLVHESLLTIPKSLSEKRENVMFVLPLHGGHLGFFEGSVLFPEPLTWMDKLVVEYANAICQWERNKLQCSDTEQVEADLE |
1 | 3nwoA | 0.10 | 0.07 | 2.45 | 1.14 | SPARKS-K | | ------------------------------------------------------------------------------------------------SSRTVPFG-DHETWVQVTTPENAQ--PHALPLIVLHGGPGMAHN-YVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWT-PQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQP---SGLVSLAICNSPALWSEAAGDLRAQAETRAALDRHEAADYLQAAAEFYRRHVCRV--------VPTPQDFADSVAQMEAEPTVYHTMNGPNHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP----KTWQPFVDHIPDVRSHVFPGTSHCTHLEK-------PEEFRAVVAQFLHQHDLAAD---------------- |
2 | 4rncA | 0.12 | 0.08 | 2.81 | 1.71 | FFAS-3D | | --------------------------------------------------------------------------------------------------REAVSVDGTSIVYRVT------GNSAGTPLVLLHGWAQSSQC-WGEQVLADLAA-DYRLIAVDLRGHGYSDAPESGYDDSANWAGDVAAVL---AAEGVTENAILLGWSYGGLVICDYLAAHGTG---AVAGAVLVGAITSIGRGEKGGKVGSAMRSAVPGAMSEDPREAIRALGAFGNALTGPPEGKGAASQALFGYSLSTRPRVRAALFNR-----------AVGHDELLRNLDIPVLVLHGTDDSVVDVSAGKHAEELI---PKSQASYWVGCNHGPFVEDPTR-------FVSEVRTFISSLGKLAGA--------------- |
3 | 3fnbA | 0.10 | 0.07 | 2.47 | 1.59 | CNFpred | | -------------LISHLYFSACFSIRAALQFTDP------------KDSEFMENFRRME---------------KLFMLAVDNS-------KIPLKSIEVPFE-GELLPGYAIISE----DKAQDTLIVVGGGDTS-REDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQ--GLHFEVDARAAISAILDWYQAP--TEKIAIAGFSGGGYFTAQAVEKD----KRIKAWIASTPIYDVAEVFRISFS-NKVAEVNLNKYAWQFG-------------------------------QVDFITSVNEVLEQAQIVD--------------YNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRIDVTLRKFSGADAHCQVN-------NFRLMHYQVFEWLNHIFK------------------- |
4 | 1h2xA | 0.12 | 0.08 | 2.99 | 1.00 | DEthreader | | MLS--------------------------------------VEAQNKI--TVPFLEQCIRGYKE-NDGTVSGDVKFSCCDPDLEWCVVGFTSFLQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGFGGFISITPN-YSVSRLIFVRHGGVLAVANIRGGGEYGETWHKGGIKQNCFDDFQCAAEYLIKEGYTSRLTINGGSNGGLLVATCANQRP--D-LFGCVIAQVGVMDMLKFHK-Y-----TIG-HA--W--------------------------------------------T--TD---YGCSDSHFWLIYSPLHNVKLQYPSMLLLTADHDDRVVPLHSLKFIATLQYVGPLLIHVDTKAGH-G--A-GKP-TAKVIEEVSDMFAFIARCLNI-D---------------- |
5 | 4x00A | 0.14 | 0.09 | 3.05 | 1.13 | SPARKS-K | | -----------------------------------------------------------------------------------------------ARDYTVTAPDGVVLAVQEAGDP------EGSPIIFIHGLLGS--RLNWSKQLQDPRLQHYRLITYDLRGHGLSGKPAEASSYTD--GRRWADDLAAIIESTHARKPVLVGWSLGGAVISNYLAAYG--DKGIAGAVYVDGVI--ELKPDQIVAHPEVYRDMIASDLQTHLDGERAFLRLCFHRQPDA------------TTFSLLLANAALA------SWDMQRAVRTVEAAKGLSKAEVPLLLLYGAQDALVK--AKPSIARAKSLNPRIRSELYADSGHAPFLEE-------PERFNRDLSDFVRMALSR------------------ |
6 | 5xb6A | 0.07 | 0.04 | 1.89 | 0.39 | MapAlign | | ---------------------------------------------------------------------------------------------MMNNKVSFTNSNTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVK-EQTAGTYAKKLAEKGFVTIAYDASYQGESG-GEPRQLENPIRTEDISAVIDYLTTLSYVDRIGAMGICAGAGYTANAAIQD----RRIKAIGTVSAVNIGSIFRNGW----ENNVKSIDALPYVEAGSNARTSDISSGEYA-----IMPLAPMKESDAPNEELRQAWEYYHTPRAQRSLNQIITYDAYHMAEYLTQPTQIVAGSQA-GS-KWMSDDLYDRA-SSQDKRYHIVEGANHMDLYDGKAY----VAEAISVLAPFFEETL-------------------- |
7 | 5xb6A | 0.07 | 0.05 | 2.04 | 0.28 | CEthreader | | -------------------------------------------------------------------------------------------MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVK-EQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLVDNTRIGAMGICAGAGYTANAAIQDR----RIKAIGTVSAVNIGSIFRNGWENVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEYLTQPTQIVAGSQAG--SKWMSDDLYDRA-SSQDKRYHIVEGANHMDLYDGKAYV----AEAISVLAPFFEETL-------------------- |
8 | 2hdwA | 0.11 | 0.08 | 2.89 | 0.86 | MUSTER | | --------------------------------------------------------NMQLQLTQEWDKTF------------------PLSAKVEHRKVTFANRYGITLAADLYLPK-NRGGDRLPAIVIGGPFGAVKEQ-SSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPERERIGVIGICGWGGMALNAVAVDK----RVKAVVTST-MYDMTRVMSKGYNDSV-TLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISRPILLIHGERAH-----SRYFSETAYAAAEPKELLIVPGASHVDLYDRLDRI------PFDRIAGFFDEHL-------------------- |
9 | 1zd4A | 0.13 | 0.11 | 3.92 | 0.75 | HHsearch | | KCSETAKVCLPMLQAALMLDGLAQLMCELKMHFDFLIGMVKPQVFLDDIGANLKPARDLGM------VT-ILVQDTALKELEKVTGNPTSCNPSDMSHGYVTVKPRVRLHFVELG--------SGPAVCLCHGFPESWYS--WRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCEVLCKEMVTFLDKLGL----SQAVFIGHDWGGMLVWYMALFYP---ERVRAVASLNTPFIPANPNESIKANP--VFDYQLYVAEELEQNLSRTFKSLFRASDESVLSPEEPSLSRMVTEEEIQFYVQQFKK--SGFRGPLNWYRNMERKSLGRKILIPALMVTAEKDFVLVPQM---SQHMEDWIPHLKRGHIEDCGHWTQMDKP-------TEVNQILIKWLDSDARN------------------ |
10 | 1zoiA | 0.11 | 0.07 | 2.61 | 1.68 | FFAS-3D | | ---------------------------------------------------------------------------------------------------YVTTKDGVQIFYK------DWGPRDAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDG-HDMDHYADDVAAVVAHL----GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQT---PGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYD-----GIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVL--SAKLLPNGALKTYKGYPHGMPTTHADV-------INADLLAFIRS---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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