>P08631 (242 residues) MGGRSSCEDPGCPRDEERAPRMGCMKSKFLQVGGNTFSKTETSASPHCPVYVPDPTSTIK PGPNSHNSNTPGIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSL ATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSY SLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVP CM |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MGGRSSCEDPGCPRDEERAPRMGCMKSKFLQVGGNTFSKTETSASPHCPVYVPDPTSTIKPGPNSHNSNTPGIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCSCCCCSSSSSSCCCCSSSSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCSSCSCCCCCCCCSSSSSSSCCCCCCCCSSSSSSSSCCCCCSSSCCCCCSCCHHHHHHHHHHCCCCCCSSCCCCCC |
Confidence | 99887888988766756567878644656567877666677888888886689998766678888888899887778888389991055898988676268919999846877265303678851010233344333221111124776413678887731788971660215577994799999357777982478999984799389659732199999999997466998402785629 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MGGRSSCEDPGCPRDEERAPRMGCMKSKFLQVGGNTFSKTETSASPHCPVYVPDPTSTIKPGPNSHNSNTPGIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM |
Prediction | 74444547525535676444403124135365464544556544444344434424244444454455444445655664310100010616575303043523030035343102223354443322333333222232222332442433433422243443200000222444431000001133544544021010233762201037534271042005103544531413443006 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCSCCCCSSSSSSCCCCSSSSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCSSCSCCCCCCCCSSSSSSSCCCCCCCCSSSSSSSSCCCCCSSSCCCCCSCCHHHHHHHHHHCCCCCCSSCCCCCC MGGRSSCEDPGCPRDEERAPRMGCMKSKFLQVGGNTFSKTETSASPHCPVYVPDPTSTIKPGPNSHNSNTPGIREAGSEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||||||||
1 | 1qcfA | 0.67 | 0.44 | 12.60 | 0.83 | DEthreader | ------------------------------------------------------------------SG-----IR----IIVVALYDYEAIHH--EDLSFQKGDQMV--VLEEKARSLA----TRKEGYISYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLQKLSVPCMS | |||||||||||||
2 | 1lckA | 0.66 | 0.44 | 12.61 | 2.71 | SPARKS-K | -------------------------------------------------------------------------------DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ | |||||||||||||
3 | 2ptkA1 | 0.54 | 0.36 | 10.49 | 1.13 | MapAlign | --------------------------------------------------------------------------------TTFVALYDYESRTETDLSFKKGERLQIVNNEGDWWLAHSLTTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
4 | 2ptkA | 0.54 | 0.36 | 10.49 | 0.72 | CEthreader | -------------------------------------------------------------------------------VTTFVALYDYESRTETDLSFKKGERLQIVNNEGDWWLAHSLTTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
5 | 1qcfA | 0.98 | 0.67 | 18.76 | 1.73 | MUSTER | ----------------------------------------------------------------------------SGIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
6 | 1qcfA | 0.98 | 0.67 | 18.76 | 1.92 | HHsearch | ----------------------------------------------------------------------------SGIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
7 | 1lckA | 0.66 | 0.44 | 12.61 | 2.24 | FFAS-3D | -------------------------------------------------------------------------------DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC- | |||||||||||||
8 | 1lckA | 0.66 | 0.44 | 12.61 | 1.00 | EigenThreader | -------------------------------------------------------------------------------DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ | |||||||||||||
9 | 3nhnA | 1.00 | 0.67 | 18.86 | 3.81 | CNFpred | -------------------------------------------------------------------------------DIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
10 | 2ptkA1 | 0.39 | 0.25 | 7.33 | 0.83 | DEthreader | -------------------------------------------------------------------------------VTTFVALYESRTET--D-LSFKKERLQI-VNNTWWLAH-SLTT-GQTGYIPSYVAPSSIQAEEWYFGKITR-RESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDN-AKGNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYS-KHADGLHRLTNCPT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |