Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCSSSSSSSCCCSSSSCCCCSSSSSSSSSSCCCCCSSSSSSSSSCCCCSSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSSSCCCCCCCCCSSSSSSSSSSSSSSSSSSSSCCSSSSSCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCSSSSSSSCCSCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCSSSSSSSCCCCCCCCSSSSSSSSSSSCHHHHHCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC CVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEGFERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAAEEGEREQNSLDSWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKVDWGLPIPSPSPIHPAHHKRDRRQIFLPEPEQPSRLQDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRALEERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPPLEEDDEEGE |
1 | 1l5gA | 0.33 | 0.26 | 7.86 | 1.17 | DEthreader | | VKPKLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEHKENPETDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEIN--PLRI----------------------D------------IHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNEQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQ------------------------------------------------ |
2 | 4g1eA2 | 0.31 | 0.27 | 8.23 | 2.97 | SPARKS-K | | CKPKLEVSVDSDQKKIYI-DDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSL----------------------TEKNDTVAGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAEKELQALEKENAQLEWELQALEKEL--------------------- |
3 | 3fcsA2 | 0.99 | 0.75 | 21.09 | 1.55 | MapAlign | | CVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNV-EFERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAA-----------SWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKV----------------------------------DWDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRA-------------------------------------------------- |
4 | 3fcsA2 | 0.99 | 0.75 | 21.10 | 1.20 | CEthreader | | CVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSN-VEFERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAA-----------SWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKVD----------------------------------WDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRAC------------------------------------------------- |
5 | 4g1eA2 | 0.30 | 0.27 | 8.16 | 2.21 | MUSTER | | CKPKLEVSVDSDQKKIYI-DDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSLTE----------------------KNDTVAGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAEKELQALEKENAQLEWELQALEKEL--------------------- |
6 | 4g1eA | 0.31 | 0.27 | 8.30 | 5.20 | HHsearch | | CKPKLEVSVDSDQKKIYI-DDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKIS-------------SLTEKNDTV---------AGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNNQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTN----------VTWGIQPAPCEKELQALENAQLEWELQALEKEL----------- |
7 | 4g1eA2 | 0.30 | 0.27 | 8.23 | 3.04 | FFAS-3D | | CKPKLEVSVDSDQKK-IYIDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSL----------------------TEKNDTVAGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPCEKELQALEKENAQL--------EWELQALEKE------------ |
8 | 4g1eA2 | 0.29 | 0.25 | 7.68 | 1.97 | EigenThreader | | CKPKLEVSVDSDQKKIYI--DDNLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIPMNCTSDMEINPLRIKISSLT------------------------EKNDTVAGDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKQNHSYSLKSSASFNVFPYKNLPIEDI---TNSTLVTTNVTWGIQPAPCEKELQALEKENAQLEWELQALEKEL------------------ |
9 | 3fcsA | 1.00 | 0.76 | 21.30 | 4.45 | CNFpred | | CVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVE-FERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAA-----------SWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKVDW----------------------------------DPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRAC------------------------------------------------- |
10 | 4g1eA | 0.33 | 0.26 | 7.72 | 1.17 | DEthreader | | VKPKLEVSVDSDQKKIYI-DDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEHKENPETDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDID-GPMNCTSDMEI-NPLRI---------------------------------GDIHTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNNQNHSYSLKSSASFNVIEFPYNLPIEDI-TNSTLVTTNVTWGIQ------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|